RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.76
LIMS4-202ENST00000480598 PTTG1O95997 202 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 MUC21Q5SSG8 566 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 IBA57Q5T440 356 aaKnown RBP10.33□□□□□ -0.76
LIMS4-202ENST00000480598 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 C18orf15Q96N68 181 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 MRPL16Q9NX20 251 aaKnown RBP10.33□□□□□ -0.76
LIMS4-202ENST00000480598 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 MUC4Q99102 2169 aa10.33□□□□□ -0.76
LIMS4-202ENST00000480598 A0A1W2PPV4 95 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 PGPA6NDG6 321 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 ZNF266Q14584 549 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 ESRGQ1W209 222 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 MED28Q9H204 178 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
LIMS4-202ENST00000480598 A0A096LPF7 62 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 H3BNG1 76 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 TNP2Q05952 138 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 Q5BKY6 102 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 PQLC2Q6ZP29 291 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 C6orf223Q8N319 242 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 HSD17B11Q8NBQ5 300 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 OR10G9Q8NGN4 311 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 OR10G7Q8NGN6 311 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 CMTM2Q8TAZ6 248 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 Q9H8V8 135 aa10.31□□□□□ -0.76
LIMS4-202ENST00000480598 GNG5P63218 68 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 Q6AWC8 147 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 AQP10Q96PS8 301 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 KRTAP1-5Q9BYS1 174 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 MDFICQ9P1T7 246 aa10.3□□□□□ -0.76
LIMS4-202ENST00000480598 ARL14EPLP0DKL9 152 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 CDC34P49427 236 aaPredicted RBP10.29□□□□□ -0.76
LIMS4-202ENST00000480598 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 ZNF575Q86XF7 245 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 UPK3BQ9BT76 320 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 NAGKQ9UJ70 344 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
LIMS4-202ENST00000480598 LENEPQ9Y5L5 61 aa10.29□□□□□ -0.76
LIMS4-202ENST00000480598 TRAV8-1A0A0A6YYK1 113 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 F6UZH7 168 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 TMED6Q8WW62 240 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 TVP23CQ96ET8 276 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 SH3BGRL3Q9H299 93 aa10.28□□□□□ -0.76
LIMS4-202ENST00000480598 PAX4O43316 350 aa10.27□□□□□ -0.77
LIMS4-202ENST00000480598 GIPP09681 153 aaPredicted RBP10.27□□□□□ -0.77
LIMS4-202ENST00000480598 STAG3L2P0CL84 134 aa10.27□□□□□ -0.77
LIMS4-202ENST00000480598 STAG3L3P0CL85 134 aa10.27□□□□□ -0.77
LIMS4-202ENST00000480598 FAM159AQ6UWV7 190 aa10.27□□□□□ -0.77
LIMS4-202ENST00000480598 SGK494Q96LW2 274 aa10.27□□□□□ -0.77
LIMS4-202ENST00000480598 PSMG3Q9BT73 122 aaPredicted RBP10.27□□□□□ -0.77
LIMS4-202ENST00000480598 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 SFTA3P0C7M3 94 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 MED14OSP0DP75 135 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 FHL2Q14192 279 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 RAB24Q969Q5 203 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
LIMS4-202ENST00000480598 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 GCHFRP30047 84 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 CRYBA4P53673 196 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
LIMS4-202ENST00000480598 LRP1BQ9NZR2 4599 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 FXYD6-FXYD2A0A087WZ82 144 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 GNRH2O43555 120 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 TDRG1Q3Y452 100 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 RPL7L1Q6DKI1 246 aaKnown RBP10.24□□□□□ -0.77
LIMS4-202ENST00000480598 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
LIMS4-202ENST00000480598 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 MBP02144 154 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 TYMSP04818 313 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 SERF2P84101 59 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 C5orf17Q8NAS9 161 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 INO80EQ8NBZ0 244 aaPredicted RBP10.23□□□□□ -0.77
LIMS4-202ENST00000480598 SUN5Q8TC36 379 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 ASB13Q8WXK3 278 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 RASL10AQ92737 203 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 SPXQ9BT56 116 aa10.23□□□□□ -0.77
LIMS4-202ENST00000480598 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
LIMS4-202ENST00000480598 TCRAP04437 139 aa10.22□□□□□ -0.77
LIMS4-202ENST00000480598 SLAQ13239 276 aa10.22□□□□□ -0.77
LIMS4-202ENST00000480598 IQCF2Q8IXL9 164 aa10.22□□□□□ -0.77
LIMS4-202ENST00000480598 OR2T35Q8NGX2 323 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms