RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 A6NJY4 79 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 CRISP2P16562 243 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 EDN2P20800 178 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 SNRPD3P62318 126 aaKnown RBP6.19□□□□□ -1.42
USP54-212ENST00000480210 OCIAD2Q56VL3 154 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 FFAR4Q5NUL3 377 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 FAM78BQ5VT40 261 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
USP54-212ENST00000480210 GTF2H5Q6ZYL4 71 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 RSG1Q9BU20 258 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 SAMD10Q9BYL1 202 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 SLC25A22Q9H936 323 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 TMEM14CQ9P0S9 112 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 SMAD5-AS1Q9Y6J3 95 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 PKD1L1Q8TDX9 2849 aa6.19□□□□□ -1.42
USP54-212ENST00000480210 IGHV3-66A0A0C4DH42 116 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 CTXND1A0A1B0GTU2 59 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 IZUMO1RA6ND01 250 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 OR11H12B2RN74 326 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 K7EQG2 157 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 ISLRO14498 428 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 ZNF253O75346 499 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 RPL23P62829 140 aaKnown RBP6.18□□□□□ -1.42
USP54-212ENST00000480210 PSMG4Q5JS54 123 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 SPATA31B1PQ5VZV4 182 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 PQLC2Q6ZP29 291 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 DCANP1Q8TF63 244 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 BORCS7Q96B45 105 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 SH3BGRL3Q9H299 93 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 SPANXA1Q9NS26 97 aa6.18□□□□□ -1.42
USP54-212ENST00000480210 J3QR89 54 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 CCL25O15444 150 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
USP54-212ENST00000480210 CCL20P78556 96 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 PSG9Q00887 426 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 PDE6HQ13956 83 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 VAMP3Q15836 100 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 LCN15Q6UWW0 184 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 Q6ZN92 141 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 NIT1Q86X76 327 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 Q8N1Y9 231 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 OR10G9Q8NGN4 311 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 OR10G7Q8NGN6 311 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 RNASE8Q8TDE3 154 aaKnown RBP6.17□□□□□ -1.42
USP54-212ENST00000480210 UHRF2Q96PU4 802 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 PRR25Q96S07 402 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 CST9LQ9H4G1 147 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 RPH3ALQ9UNE2 315 aa6.17□□□□□ -1.42
USP54-212ENST00000480210 IGKV3-7A0A075B6H7 116 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 DIRC3C9JPN6 131 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
USP54-212ENST00000480210 CD7P09564 240 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 IGLC2P0DOY2 106 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 CDC34P49427 236 aaPredicted RBP6.16□□□□□ -1.42
USP54-212ENST00000480210 BATFQ16520 125 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 BAGE3Q86Y29 109 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 BAGE2Q86Y30 109 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 WFDC3Q8IUB2 231 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 MRAPQ8TCY5 172 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 GNB1LQ9BYB4 327 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 AGRNO00468 2067 aa6.16□□□□□ -1.42
USP54-212ENST00000480210 K7EIL1 84 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 SOCS3O14543 225 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 STAG3L2P0CL84 134 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 STAG3L3P0CL85 134 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 CTRLP40313 264 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 TFPI2P48307 235 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 DEFB121Q5J5C9 76 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 CST9LP1Q5W188 147 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 OR10G8Q8NGN5 311 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
USP54-212ENST00000480210 CLUHP3Q96NS8 147 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 PAXXQ9BUH6 204 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 MAP6D1Q9H9H5 199 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 ST20Q9HBF5 79 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
USP54-212ENST00000480210 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 TRAV9-2A0A087WT02 112 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 LOC102724200A0A096LPH7 203 aaPredicted RBP6.14□□□□□ -1.43
USP54-212ENST00000480210 TRAV5A0A0B4J249 113 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 CXorf1O96002 111 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 GPX1P07203 203 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 IGHV4-30-4P0DP06 118 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 TSPOP30536 169 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 DEFB131AP59861 70 aa6.14□□□□□ -1.43
USP54-212ENST00000480210 SEC11AP67812 179 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms