RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 GATD1Q8NB37 220 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 RAX2Q96IS3 184 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 ACANP16112 2415 aa8.29□□□□□ -1.08
VTI1A-204ENST00000480057 CCL24O00175 119 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 CSN3P07498 182 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-204ENST00000480057 NDUFA6P56556 154 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 RIGQ13278 110 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 MRPL54Q6P161 138 aaKnown RBP8.28□□□□□ -1.08
VTI1A-204ENST00000480057 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 Q71RC1 249 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-204ENST00000480057 DLX4Q92988 240 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-204ENST00000480057 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
VTI1A-204ENST00000480057 CITED2Q99967 270 aaPredicted RBP8.28□□□□□ -1.08
VTI1A-204ENST00000480057 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
VTI1A-204ENST00000480057 DUSP14O95147 198 aaKnown RBP8.27□□□□□ -1.09
VTI1A-204ENST00000480057 CTRLP40313 264 aa8.27□□□□□ -1.09
VTI1A-204ENST00000480057 ZFAND2AQ8N6M9 145 aa8.27□□□□□ -1.09
VTI1A-204ENST00000480057 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
VTI1A-204ENST00000480057 IGKV3-7A0A075B6H7 116 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 TRAV21A0A0B4J279 112 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 SPINK4O60575 86 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 APCSP02743 223 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 EBLN2Q6P2I7 272 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 NDUFA11Q86Y39 141 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 DYNLRB2Q8TF09 96 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
VTI1A-204ENST00000480057 A0A0J9YX75 114 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 F2Z2F3 143 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 ZNF688P0C7X2 276 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-204ENST00000480057 LEPP41159 167 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 RAB4BP61018 213 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 Q0VG73 95 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 PSMG4Q5JS54 123 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 FER1L6-AS1Q8NA97 138 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-204ENST00000480057 OTOGQ6ZRI0 2925 aa8.25□□□□□ -1.09
VTI1A-204ENST00000480057 OR4C46A6NHA9 309 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 A8MTW9 85 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 KLLNB2CW77 178 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 ORM1P02763 201 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 FRMD6-AS1P0C7T7 363 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 GZMBP10144 247 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 TSPOP30536 169 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 OR10J3Q5JRS4 329 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 ZNF493Q6ZR52 646 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 HIST3H2BBQ8N257 126 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 OR2K2Q8NGT1 345 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 DUX3Q96PT4 197 aa8.24□□□□□ -1.09
VTI1A-204ENST00000480057 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 A0A1W2PRX2 142 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 ZNF705DP0CH99 300 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-204ENST00000480057 ZNF705BP0CI00 300 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-204ENST00000480057 TFPI2P48307 235 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 CAMPP49913 170 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 CMC4P56277 68 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-204ENST00000480057 DNLZQ5SXM8 178 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 LYZL1Q6UWQ5 148 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 ZNF575Q86XF7 245 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
VTI1A-204ENST00000480057 F6UB75 175 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 GPX1P07203 203 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 ESDP10768 282 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 SLAQ13239 276 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 C11orf44Q8N8P7 122 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
VTI1A-204ENST00000480057 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
VTI1A-204ENST00000480057 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 SNAI2O43623 268 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 HLA-DRB4P13762 266 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 S100A2P29034 98 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 CACNG7P62955 275 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 CD300EQ496F6 205 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-204ENST00000480057 PRR9Q5T870 116 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 PACRGQ96M98 296 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-204ENST00000480057 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 HLA-DRB4X5D2U9 266 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 NOTCH2Q04721 2471 aa8.21□□□□□ -1.1
VTI1A-204ENST00000480057 LOC102724200A0A096LPH7 203 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-204ENST00000480057 C7orf71A4D174 169 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 SRIP30626 198 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 CDKN1BP46527 198 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 AKR1D1P51857 326 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 DEFB1P60022 68 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-204ENST00000480057 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
VTI1A-204ENST00000480057 MAP6D1Q9H9H5 199 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms