RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 BAGE2Q86Y30 109 aa9.16□□□□□ -0.94
TRAPPC12-218ENST00000479897 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
TRAPPC12-218ENST00000479897 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
TRAPPC12-218ENST00000479897 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
TRAPPC12-218ENST00000479897 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
TRAPPC12-218ENST00000479897 GPX1P07203 203 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 ZNF674Q2M3X9 581 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 Q6ZWC4 215 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 MEGF8Q7Z7M0 2845 aa9.15□□□□□ -0.94
TRAPPC12-218ENST00000479897 TRAV12-2A0A075B6T6 113 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 GCGP01275 180 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 CEBPGP53567 150 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 FXYD7P58549 80 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 ZNF705AQ6ZN79 300 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 TMEM256Q8N2U0 113 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 ASCL2Q99929 193 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 XCL2Q9UBD3 114 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
TRAPPC12-218ENST00000479897 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 ZNF324O75467 553 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 ZNF80P51504 273 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 DEFA6Q01524 100 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 BTN1A1Q13410 526 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 B9D2Q9BPU9 175 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 BIN3Q9NQY0 253 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 NAT8Q9UHE5 227 aa9.13□□□□□ -0.95
TRAPPC12-218ENST00000479897 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 LINC01551Q86U37 167 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 NHLRC2Q8NBF2 726 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 RNF183Q96D59 192 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 NIPSNAP3BQ9BS92 247 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 SEC11CQ9BY50 192 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 GOLT1BQ9Y3E0 138 aa9.12□□□□□ -0.95
TRAPPC12-218ENST00000479897 TRAV12-3A0A0B4J271 114 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 H7BYZ3 331 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 J3KRW8 73 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 K7EN84 100 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 CRIP1P50238 77 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 TMEM241Q24JQ0 296 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 FAM162BQ5T6X4 162 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 NEU1Q99519 415 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 PYGO2Q9BRQ0 406 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 SDF2L1Q9HCN8 221 aa9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 PRKDCP78527 4128 aaKnown RBP9.11□□□□□ -0.95
TRAPPC12-218ENST00000479897 C19orf71A6NCJ1 209 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 SH2D1AO60880 128 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 PNRC1Q12796 327 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 C10orf91Q5T1B1 145 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 RCHY1Q96PM5 261 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
TRAPPC12-218ENST00000479897 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 SPRY2O43597 315 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 MGST1P10620 155 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 RPL23P62829 140 aaKnown RBP9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 X6R8D5 127 aa9.09□□□□□ -0.95
TRAPPC12-218ENST00000479897 FBN3Q75N90 2809 aa9.09□□□□□ -0.96
TRAPPC12-218ENST00000479897 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 F8W036 122 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 CXCL1P09341 107 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 ANXA2RQ3ZCQ2 193 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 PRR27Q6MZM9 219 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 Q6ZQT7 251 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 ISOC2Q96AB3 205 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 KCNS1Q96KK3 526 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 TMEM208Q9BTX3 173 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 C11orf21Q9P2W6 132 aa9.08□□□□□ -0.96
TRAPPC12-218ENST00000479897 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 OR5I1Q13606 314 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 ADIRFQ15847 76 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 SLC7A5P1Q8MH63 180 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 LINC01587Q99440 93 aa9.07□□□□□ -0.96
TRAPPC12-218ENST00000479897 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
TRAPPC12-218ENST00000479897 IGKV3D-20A0A0C4DH25 116 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms