RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CACFD1Q9UGQ2 172 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 FLVCR2Q9UPI3 526 aa3.22□□□□□ -1.89
UPF3A-205ENST00000479712 LPAP08519 4548 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TRBV7-1A0A0A6YYK4 115 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 A0A1B0GW64 132 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 IGLC7A0M8Q6 106 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 A8MWP6 167 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 DISC1C4P0D8 188 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 H0Y980 276 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 J3QRK9 145 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 RGS5O15539 181 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 GGCTO75223 188 aaKnown RBP3.21□□□□□ -1.9
UPF3A-205ENST00000479712 SNAPC5O75971 98 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 S1PR2O95136 353 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 IGHV3-11P01762 117 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 APCSP02743 223 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 CD3DP04234 171 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 CTSDP07339 412 aaPredicted RBP3.21□□□□□ -1.9
UPF3A-205ENST00000479712 AKAIN1P0CW23 69 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TRAPPC2P0DI81 140 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TRAPPC2BP0DI82 140 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 AZU1P20160 251 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 LPAR6P43657 344 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 PAFAH1B2P68402 229 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 MPV17L2Q567V2 206 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 C10orf55Q5SWW7 151 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 GPHB5Q86YW7 130 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 GDPD1Q8N9F7 314 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 LSM10Q969L4 123 aaKnown RBP3.21□□□□□ -1.9
UPF3A-205ENST00000479712 DIRAS2Q96HU8 199 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM56Q96MV1 263 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 PRRT1Q99946 306 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 HRASLSQ9HDD0 168 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 NDUFA4L2Q9NRX3 87 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM14BQ9NUH8 114 aa3.21□□□□□ -1.9
UPF3A-205ENST00000479712 YTHDF2Q9Y5A9 579 aaKnown RBP3.21□□□□□ -1.9
UPF3A-205ENST00000479712 TRAV3A0A0B4J244 114 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 TEX50A0A1B0GTY4 177 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 ANKRD20A5PA0PJZ0 165 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 KRBOX1C9JBD0 128 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 E7EUB6 86 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 NDUFC2-KCTD14E9PQ53 114 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 BPY2O14599 106 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 CDS2O95674 445 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 KRASP01116 189 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 IGKV1-39P01597 117 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 IGKV1D-39P04432 117 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 FAUP35544 74 aaKnown RBP3.2□□□□□ -1.9
UPF3A-205ENST00000479712 ETV6P41212 452 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 PIGPP57054 158 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 AP3S2P59780 193 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 HSPE1P61604 102 aaKnown RBP3.2□□□□□ -1.9
UPF3A-205ENST00000479712 PRCDQ00LT1 54 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 WT1-ASQ06250 92 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 SLC16A13Q7RTY0 426 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 Q8N402 240 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 OR1P1Q8NH06 330 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 MCFD2Q8NI22 146 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 CASTOR1Q8WTX7 329 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 NARS2Q96I59 477 aaKnown RBP3.2□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM243Q9BU79 118 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 ALX4Q9H161 411 aaPredicted RBP3.2□□□□□ -1.9
UPF3A-205ENST00000479712 COPZ2Q9P299 210 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 SCP2D1Q9UJQ7 156 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 C14orf166Q9Y224 244 aaKnown RBP3.2□□□□□ -1.9
UPF3A-205ENST00000479712 OR51B2Q9Y5P1 312 aa3.2□□□□□ -1.9
UPF3A-205ENST00000479712 IGKV2D-24A0A075B6R9 120 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 C3orf85A0A1B0GTC6 90 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 DUXBA0A1W2PPF3 345 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 FABP12A6NFH5 140 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 CRYM-AS1A6NIL9 109 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF705GA8MUZ8 300 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 CORTO00230 105 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 GCGP01275 180 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 TRBV12-3P01733 135 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 HLA-AP01891 365 aaKnown RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 S100A9P06702 114 aaKnown RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 C8orf88P0DMB2 117 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 OR13C7P0DN81 318 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 DEFA4P12838 97 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 S100A5P33763 92 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 G6PCP35575 357 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 LINC00299Q6ZSB3 139 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 LGI3Q8N145 548 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 OR4C16Q8NGL9 310 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 OR13C8Q8NGS7 320 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 RBPMSQ93062 196 aaKnown RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 SLC25A21Q9BQT8 299 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 RTBDNQ9BSG5 229 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF436Q9C0F3 470 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 NAA60Q9H7X0 242 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM56-RWDD3S4R434 201 aa3.19□□□□□ -1.9
UPF3A-205ENST00000479712 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms