RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ITPR1Q14643 2758 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 AZU1P20160 251 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 FOXC2Q99958 501 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 SMAD5-AS1Q9Y6J3 95 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 ERCC8Q13216 396 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
PDZRN3-208ENST00000479530 MAPKAPK5-AS1Q8N8E1 139 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 TMEM158Q8WZ71 300 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 HIVEP3Q5T1R4 2406 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 TMEM8BA6NDV4 472 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 NCBP2LA6PVI3 153 aaKnown RBP10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 IGKCP01834 107 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 FCER1GP30273 86 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 CRYBA4P53673 196 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 WFDC2Q14508 124 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 FBXL19-AS1Q494R0 122 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 OR11H6Q8NGC7 330 aa10.3□□□□□ -0.76
PDZRN3-208ENST00000479530 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 TMEM160Q9NX00 188 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 TRAV40A0A0B4J280 105 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 CEACAM3P40198 252 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 RAB9AP51151 201 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 SMAGPQ0VAQ4 97 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
PDZRN3-208ENST00000479530 C5orf64Q2M2E5 130 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 PIFOQ8TCI5 191 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 RAB1BQ9H0U4 201 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 TRGV3P03979 118 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 CEND1Q8N111 149 aa10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
PDZRN3-208ENST00000479530 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 LINC01546A6NGU7 62 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 ODF3BA8MYP8 253 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 DTX2Q86UW9 622 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 SIGMAR1Q99720 223 aa10.27□□□□□ -0.76
PDZRN3-208ENST00000479530 H3BMG7 143 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 NDUFA3O95167 84 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 PRTN3P24158 256 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 Q6ZQT7 251 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 NPBQ8NG41 125 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 RNF5Q99942 180 aa10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
PDZRN3-208ENST00000479530 MFAP4P55083 255 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 SRSF8Q9BRL6 282 aaKnown RBP10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 IGLV2-18A0A075B6J9 118 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 IGLL5B9A064 214 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 DPM2O94777 84 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 E9PLD3 99 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 RPL7P18124 248 aaKnown RBP10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 TIMD4Q96H15 378 aa10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 NXT2Q9NPJ8 142 aaKnown RBP10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
PDZRN3-208ENST00000479530 CELSR2Q9HCU4 2923 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 CKS1BP61024 79 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 TMEM190Q8WZ59 177 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 IGKV3D-20A0A0C4DH25 116 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 CTSGP08311 255 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 EFNA4P52798 201 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 LCNL1Q6ZST4 164 aa10.25□□□□□ -0.77
PDZRN3-208ENST00000479530 IGHV3-66A0A0C4DH42 116 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 FABP5P3A8MUU1 101 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 FOXI2Q6ZQN5 318 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 LINC01548A6NM66 108 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 INSL3P51460 131 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 CSMD2Q7Z408 3487 aa10.24□□□□□ -0.77
PDZRN3-208ENST00000479530 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 KLRB1Q12918 225 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 LY6DQ14210 128 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 Q8N8P6 123 aa10.23□□□□□ -0.77
PDZRN3-208ENST00000479530 IGHV7-81A0A0B4J1V7 117 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 M0R1W7 72 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 SPAG8Q99932 426 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms