RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 S100A1P23297 94 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 INSL3P51460 131 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 TAS2R60P59551 318 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 DEFB1P60022 68 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 UBE2G1P62253 170 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 SNRPD3P62318 126 aaKnown RBP4.94□□□□□ -1.62
USP48-208ENST00000479177 GUCA2BQ16661 112 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 ODF3L2Q3SX64 289 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 PSMG4Q5JS54 123 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 C9orf66Q5T8R8 295 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 VGLL1Q99990 258 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 NIPSNAP3BQ9BS92 247 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 MCRIP2Q9BUT9 160 aaKnown RBP4.94□□□□□ -1.62
USP48-208ENST00000479177 MAP6D1Q9H9H5 199 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 NAT8Q9UHE5 227 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
USP48-208ENST00000479177 PGPEP1LA6NFU8 196 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 FBLL1A6NHQ2 334 aaKnown RBP4.93□□□□□ -1.62
USP48-208ENST00000479177 F6UB75 175 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 NUDT3O95989 172 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 IGLV2-8P01709 118 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 APOC3P02656 99 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 GNG4P50150 75 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 DEFB131AP59861 70 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 RPL23P62829 140 aaKnown RBP4.93□□□□□ -1.62
USP48-208ENST00000479177 FLI1Q01543 452 aaPredicted RBP4.93□□□□□ -1.62
USP48-208ENST00000479177 HIST1H1AQ02539 215 aaPredicted RBP4.93□□□□□ -1.62
USP48-208ENST00000479177 ERCC8Q13216 396 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 TMEM241Q24JQ0 296 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 C9orf47Q6ZRZ4 202 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 LINC01551Q86U37 167 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 OR8A1Q8NGG7 326 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 Q8TAT8 98 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 SGK494Q96LW2 274 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 GPR61Q9BZJ8 451 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 SDF2L1Q9HCN8 221 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 PSG8Q9UQ74 426 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 LY96Q9Y6Y9 160 aa4.93□□□□□ -1.62
USP48-208ENST00000479177 A0A0J9YX75 114 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 K7EN84 100 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 ZNF705DP0CH99 300 aaPredicted RBP4.92□□□□□ -1.62
USP48-208ENST00000479177 ZNF705BP0CI00 300 aaPredicted RBP4.92□□□□□ -1.62
USP48-208ENST00000479177 IGLL1P15814 213 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 PNRC1Q12796 327 aaPredicted RBP4.92□□□□□ -1.62
USP48-208ENST00000479177 ADIRFQ15847 76 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 GDF5OSQ5U4N7 250 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 COX8CQ7Z4L0 72 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 PRNTQ86SH4 94 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 BAGE2Q86Y30 109 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 SVBPQ8N300 66 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 NHLRC2Q8NBF2 726 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 OR10J6PQ8NGY7 276 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 TVP23CQ96ET8 276 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 SMIM12Q96EX1 92 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 ASCL2Q99929 193 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 AGPAT4-IT1Q9H0P7 198 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 SAV1Q9H4B6 383 aaPredicted RBP4.92□□□□□ -1.62
USP48-208ENST00000479177 PPP1R14DQ9NXH3 145 aa4.92□□□□□ -1.62
USP48-208ENST00000479177 DNHD1Q96M86 4753 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 KNCNA6PVL3 124 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 A8MTW9 85 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 OR11H12B2RN74 326 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 M0R036 132 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 CD7P09564 240 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 CT45A10P0DMU9 189 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 HLA-DRB4P13762 266 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ZNF138P52744 262 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 TMEM78Q5T7P6 136 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 EBLN2Q6P2I7 272 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 TMEM183AQ8IXX5 376 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 OCC1Q8TAD7 63 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ISOC2Q96AB3 205 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ZC2HC1AQ96GY0 325 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 FAM19A4Q96LR4 140 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 LINC00477Q96M19 166 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ODF3Q96PU9 254 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 PRR25Q96S07 402 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ZNF492Q9P255 531 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 ZFP30Q9Y2G7 519 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 HLA-DRB4X5D2U9 266 aa4.91□□□□□ -1.62
USP48-208ENST00000479177 TRBV7-9A0A0J9YWB2 115 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 RBMY1BA6NDE4 496 aaKnown RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 RBMY1EA6NEQ0 496 aaKnown RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 H3BMM0 161 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 DUSP14O95147 198 aaKnown RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 SNAPINO95295 136 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 GCGP01275 180 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 RBMY1DP0C7P1 496 aaKnown RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 CRISP2P16562 243 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 CMC4P56277 68 aaPredicted RBP4.9□□□□□ -1.63
USP48-208ENST00000479177 OR5I1Q13606 314 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 RHEBQ15382 184 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 ACTL10Q5JWF8 245 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 SAPCD1Q5SSQ6 148 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 PRR9Q5T870 116 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 ATRAIDQ6UW56 229 aa4.9□□□□□ -1.63
USP48-208ENST00000479177 AMTNQ6UX39 209 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms