RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FHITP49789 147 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 CLLU1Q5K131 121 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 EPDR1Q9UM22 224 aa11.03□□□□□ -0.64
C9orf3-217ENST00000479161 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-217ENST00000479161 MAP1LC3B2A6NCE7 125 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 TCRAP04437 139 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 PRB4P10163 310 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-217ENST00000479161 RAB5CP51148 216 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
C9orf3-217ENST00000479161 Q6AWC8 147 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 MAP1LC3BQ9GZQ8 125 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 DNAH1Q9P2D7 4330 aa11.02□□□□□ -0.65
C9orf3-217ENST00000479161 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 EMP1P54849 157 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 DAZ2Q13117 558 aaKnown RBP11.01□□□□□ -0.65
C9orf3-217ENST00000479161 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
C9orf3-217ENST00000479161 GOLT1AQ6ZVE7 132 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 SLC51BQ86UW2 128 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
C9orf3-217ENST00000479161 LINC00612Q8N6U2 182 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
C9orf3-217ENST00000479161 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
C9orf3-217ENST00000479161 DAD1P61803 113 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 BTN1A1Q13410 526 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 TP53TG3Q9ULZ0 132 aa11□□□□□ -0.65
C9orf3-217ENST00000479161 RYR2Q92736 4967 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 FAM74A7A6NL05 159 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 PRM2P04554 102 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 PPT1P50897 306 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 RAB14P61106 215 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 TMEM75Q8N9X5 138 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 Q8TAT8 98 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 MED9Q9NWA0 146 aa10.99□□□□□ -0.65
C9orf3-217ENST00000479161 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 IGHV1OR15-1A0A075B7D0 117 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 CBY3A6NI87 242 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 J3KRW8 73 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 HTN1P15515 57 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 SAPCD1Q5SSQ6 148 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 PRR9Q5T870 116 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 LGALS9CQ6DKI2 356 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 C11orf72Q8NBR9 251 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 NDFIP1Q9BT67 221 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
C9orf3-217ENST00000479161 SNURFLB1AK76 121 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 H2AFB1P0C5Y9 115 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 FGF8P55075 233 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-217ENST00000479161 IQCF2Q8IXL9 164 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 SFT2D1Q8WV19 159 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 TVP23CQ96ET8 276 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 TREM1Q9NP99 234 aa10.97□□□□□ -0.65
C9orf3-217ENST00000479161 TRAV21A0A0B4J279 112 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 IGLL5B9A064 214 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 F6UZH7 168 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 SULT1A2P50226 295 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 TCL1AP56279 114 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 GNG5P63218 68 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 FLI1Q01543 452 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-217ENST00000479161 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 FAM213BQ8TBF2 198 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
C9orf3-217ENST00000479161 PSG8Q9UQ74 426 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 KLF12Q9Y4X4 402 aa10.96□□□□□ -0.65
C9orf3-217ENST00000479161 MUC4Q99102 2169 aa10.95□□□□□ -0.66
C9orf3-217ENST00000479161 IGHV4-4A0A075B6R2 117 aa10.95□□□□□ -0.66
C9orf3-217ENST00000479161 TRAV8-1A0A0A6YYK1 113 aa10.95□□□□□ -0.66
C9orf3-217ENST00000479161 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
C9orf3-217ENST00000479161 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
C9orf3-217ENST00000479161 TEX46H3BTG2 121 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 PEX7O00628 323 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 ATP5G1P05496 136 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 ATP5G3P48201 142 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 KCNS1Q96KK3 526 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 TXNDC17Q9BRA2 123 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 NDUFAF3Q9BU61 184 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
C9orf3-217ENST00000479161 SPINK4O60575 86 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
C9orf3-217ENST00000479161 DEFB130BP0DP73 79 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 DEFB130AP0DP74 79 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 UBE2G2P60604 165 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 SMUG1Q53HV7 270 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 COMMD7Q86VX2 200 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 GSN-AS1Q9NRJ2 163 aa10.93□□□□□ -0.66
C9orf3-217ENST00000479161 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 TRGV11A0A075B6L2 103 aa10.92□□□□□ -0.66
C9orf3-217ENST00000479161 PFN1P07737 140 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms