RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TMEM189A5PLL7 270 aa7.35□□□□□ -1.23
HDAC6-222ENST00000478095 TCRAP04437 139 aa7.35□□□□□ -1.23
HDAC6-222ENST00000478095 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
HDAC6-222ENST00000478095 PHLDA1Q8WV24 401 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-222ENST00000478095 C20orf144Q9BQM9 153 aa7.35□□□□□ -1.23
HDAC6-222ENST00000478095 PLAC8L1A1L4L8 177 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 NUPR2A6NF83 97 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 F6UZH7 168 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 IFNA7P01567 189 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 SPART-AS1P0CW21 52 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 C12orf74Q32Q52 190 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 CEMP1Q6PRD7 247 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-222ENST00000478095 DPPA3Q6W0C5 159 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 MBD3L1Q8WWY6 194 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 DKK2Q9UBU2 259 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 EPDR1Q9UM22 224 aa7.34□□□□□ -1.23
HDAC6-222ENST00000478095 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
HDAC6-222ENST00000478095 ZNF324O75467 553 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-222ENST00000478095 NMBP08949 121 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 ATP5G3P48201 142 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 CST9LP1Q5W188 147 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 EIF5AL1Q6IS14 154 aaKnown RBP7.33□□□□□ -1.24
HDAC6-222ENST00000478095 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 ARL6IP6Q8N6S5 226 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 CYB561D1Q8N8Q1 229 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 RNASE8Q8TDE3 154 aaKnown RBP7.33□□□□□ -1.24
HDAC6-222ENST00000478095 TVP23CQ96ET8 276 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 LINC00479Q96M42 142 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 ATG101Q9BSB4 218 aa7.33□□□□□ -1.24
HDAC6-222ENST00000478095 TRAV34A0A0B4J273 112 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 TRBV7-9A0A0J9YWB2 115 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 SERTM2A0A1B0GWG4 89 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 CBY3A6NI87 242 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 K7EQM0 130 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 PEX7O00628 323 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 RGS13O14921 159 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 PAGE4O60829 102 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 SULT1A2P50226 295 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 CCL20P78556 96 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 MUC21Q5SSG8 566 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 PRNTQ86SH4 94 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 TMEM263Q8WUH6 116 aaKnown RBP7.32□□□□□ -1.24
HDAC6-222ENST00000478095 PYGO2Q9BRQ0 406 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 TREM1Q9NP99 234 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 NOP10Q9NPE3 64 aaKnown RBP7.32□□□□□ -1.24
HDAC6-222ENST00000478095 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 PSG8Q9UQ74 426 aa7.32□□□□□ -1.24
HDAC6-222ENST00000478095 IGHV1OR15-1A0A075B7D0 117 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 TRAV10A0A0B4J240 114 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 TEX48A0A1B0GUV7 120 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 IGLV2-11P01706 119 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 DEFB130BP0DP73 79 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 DEFB130AP0DP74 79 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 HTN3P15516 51 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 RAB5CP51148 216 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 DAD1P61803 113 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 FLI1Q01543 452 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-222ENST00000478095 ALKAL2Q6UX46 152 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 ZNF493Q6ZR52 646 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 TMEM75Q8N9X5 138 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 NDFIP1Q9BT67 221 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 NAGKQ9UJ70 344 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 KLK5Q9Y337 293 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-222ENST00000478095 LENEPQ9Y5L5 61 aa7.31□□□□□ -1.24
HDAC6-222ENST00000478095 DEFB131BA0A096LNP1 70 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 LYRM9A8MSI8 78 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 IGLL5B9A064 214 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 C11orf94C9JXX5 98 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 Q6AWC8 147 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 EIF4E3Q8N5X7 224 aaKnown RBP7.3□□□□□ -1.24
HDAC6-222ENST00000478095 C2CD4CQ8TF44 421 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 NKX6-2Q9C056 277 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-222ENST00000478095 GSN-AS1Q9NRJ2 163 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 GNG13Q9P2W3 67 aa7.3□□□□□ -1.24
HDAC6-222ENST00000478095 TIMM8BQ9Y5J9 83 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-222ENST00000478095 SNURFLB1AK76 121 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 PPT1P50897 306 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 ZNF80P51504 273 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-222ENST00000478095 Q86TA4 180 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 HIST1H2BAQ96A08 127 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 LINC00467Q9BRT7 94 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 ARL2-SNX15V9GYD0 113 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
HDAC6-222ENST00000478095 TRAV1-1A0A0B4J248 108 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GAGE7O76087 117 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GCGP01275 180 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 AKR1C3P42330 323 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 UBE2G1P62253 170 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 TMEM183BQ1AE95 376 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 ANXA2RQ3ZCQ2 193 aa7.28□□□□□ -1.24
HDAC6-222ENST00000478095 SMUG1Q53HV7 270 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms