RNA–Protein interactions for RNA: ENST00000477581.1

DENND1B-208, Transcript of DENN domain containing 1B, human

TSL 3

Gene DENND1B, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND1B-208	ENST00000477581	TRPT1	Q86TN4	253 aa	Known RBP	10.43	□□□□□ -0.74
DENND1B-208	ENST00000477581	LINC00477	Q96M19	166 aa		10.43	□□□□□ -0.74
DENND1B-208	ENST00000477581	NIPSNAP3B	Q9BS92	247 aa		10.43	□□□□□ -0.74
DENND1B-208	ENST00000477581	SAV1	Q9H4B6	383 aa	Predicted RBP	10.43	□□□□□ -0.74
DENND1B-208	ENST00000477581	LENEP	Q9Y5L5	61 aa		10.43	□□□□□ -0.74
DENND1B-208	ENST00000477581	TRBV7-9	A0A0J9YWB2	115 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581		A0A0J9YX75	114 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581		C9JQL5	133 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	NPIPB6	E9PJ23	425 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	HLA-DRB4	P13762	266 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	GNG4	P50150	75 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	NANOS2	P60321	138 aa	Known RBP	10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	SAPCD1	Q5SSQ6	148 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581		Q86TA4	180 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	SLC7A5P1	Q8MH63	180 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	ODF3	Q96PU9	254 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	ZFP30	Q9Y2G7	519 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	HLA-DRB4	X5D2U9	266 aa		10.42	□□□□□ -0.74
DENND1B-208	ENST00000477581	PRAC2	D3DTV9	90 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581		F8W036	122 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	ZNF138	P52744	262 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	SEC11C	Q9BY50	192 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	BIN3	Q9NQY0	253 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	PPP1R14D	Q9NXH3	145 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	PSG8	Q9UQ74	426 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	LY96	Q9Y6Y9	160 aa		10.41	□□□□□ -0.74
DENND1B-208	ENST00000477581	LTA	P01374	205 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	TSPO	P30536	169 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	PNRC1	Q12796	327 aa	Predicted RBP	10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	CENPW	Q5EE01	88 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	ACTL10	Q5JWF8	245 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	PRNT	Q86SH4	94 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	CLUHP3	Q96NS8	147 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	DERL1	Q9BUN8	251 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	NAT8	Q9UHE5	227 aa		10.4	□□□□□ -0.74
DENND1B-208	ENST00000477581	TRAV8-1	A0A0A6YYK1	113 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	TRAV34	A0A0B4J273	112 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	CT45A10	P0DMU9	189 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	LEP	P41159	167 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	TMEM241	Q24JQ0	296 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	BAGE2	Q86Y30	109 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581		Q8NAQ8	132 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	IGF2BP2-AS1	Q96M15	143 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	VGLL1	Q99990	258 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	AGPAT4-IT1	Q9H0P7	198 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	ZNF492	Q9P255	531 aa		10.39	□□□□□ -0.75
DENND1B-208	ENST00000477581	TRAV10	A0A0B4J240	114 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	IGHV4-28	A0A0C4DH34	117 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581		F6UB75	175 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581		H3BMM0	161 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	IGLV2-11	P01706	119 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	TMEM183A	Q8IXX5	376 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	OR4B1	Q8NGF8	309 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	LINC00479	Q96M42	142 aa		10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.38	□□□□□ -0.75
DENND1B-208	ENST00000477581	KNCN	A6PVL3	124 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581		A8MTW9	85 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581	AMBP	P02760	352 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581	ERCC8	Q13216	396 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581	GDF5OS	Q5U4N7	250 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581		Q8TAT8	98 aa		10.37	□□□□□ -0.75
DENND1B-208	ENST00000477581	IGLL5	B9A064	214 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	DEFB4A	O15263	64 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	ZNF705D	P0CH99	300 aa	Predicted RBP	10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	ZNF705B	P0CI00	300 aa	Predicted RBP	10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	CRISP2	P16562	243 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	SMUG1	Q53HV7	270 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	C10orf91	Q5T1B1	145 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	TVP23C	Q96ET8	276 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	SGK494	Q96LW2	274 aa		10.36	□□□□□ -0.75
DENND1B-208	ENST00000477581	TRBV20OR9-2	A0A075B6H5	130 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	TEX48	A0A1B0GUV7	120 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	TMEM189	A5PLL7	270 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	MGST1	P10620	155 aa	Known RBP	10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	ADCYAP1	P18509	176 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	DEFB1	P60022	68 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	COX8C	Q7Z4L0	72 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	LINC01551	Q86U37	167 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	SVBP	Q8N300	66 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	SDF2L1	Q9HCN8	221 aa		10.35	□□□□□ -0.75
DENND1B-208	ENST00000477581	GIG44	P09565	113 aa	Predicted RBP	10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	S100A1	P23297	94 aa		10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	CDKN1B	P46527	198 aa		10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	ADIRF	Q15847	76 aa		10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	FAM19A4	Q96LR4	140 aa		10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	MLST8	Q9BVC4	326 aa		10.34	□□□□□ -0.75
DENND1B-208	ENST00000477581	SMIM9	A6NGZ8	99 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581		B4DEV8	164 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	ATP6V1G1	O75348	118 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	SNAPIN	O95295	136 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	IGKV3-20	P01619	116 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	APOC3	P02656	99 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	GPX1	P07203	203 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	RBMY1A1	P0DJD3	496 aa	Known RBP	10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	RBMY1C	P0DJD4	496 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	PRB4	P10163	310 aa	Predicted RBP	10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	RBMY1F	Q15415	496 aa	Known RBP	10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	FAM162B	Q5T6X4	162 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	AMTN	Q6UX39	209 aa		10.33	□□□□□ -0.76
DENND1B-208	ENST00000477581	CSNK1G2-AS1	Q8NCQ2	148 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms