RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 DEFB130BP0DP73 79 aa8.8□□□□□ -1
APTX-220ENST00000476858 DEFB130AP0DP74 79 aa8.8□□□□□ -1
APTX-220ENST00000476858 HTN3P15516 51 aa8.8□□□□□ -1
APTX-220ENST00000476858 CSN1S1P47710 185 aa8.8□□□□□ -1
APTX-220ENST00000476858 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
APTX-220ENST00000476858 LINC00476Q8WZB0 136 aa8.8□□□□□ -1
APTX-220ENST00000476858 C8orf49Q96NF6 230 aa8.8□□□□□ -1
APTX-220ENST00000476858 NIPSNAP3BQ9BS92 247 aa8.8□□□□□ -1
APTX-220ENST00000476858 MAP1LC3BQ9GZQ8 125 aa8.8□□□□□ -1
APTX-220ENST00000476858 NOP10Q9NPE3 64 aaKnown RBP8.8□□□□□ -1
APTX-220ENST00000476858 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
APTX-220ENST00000476858 KANTRA0A1W2PQU2 76 aa8.79□□□□□ -1
APTX-220ENST00000476858 RBAKDNA6NC62 111 aa8.79□□□□□ -1
APTX-220ENST00000476858 TCRAP04437 139 aa8.79□□□□□ -1
APTX-220ENST00000476858 ZNF80P51504 273 aaPredicted RBP8.79□□□□□ -1
APTX-220ENST00000476858 MUC21Q5SSG8 566 aa8.79□□□□□ -1
APTX-220ENST00000476858 AKAP14Q86UN6 197 aa8.79□□□□□ -1
APTX-220ENST00000476858 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
APTX-220ENST00000476858 C11orf72Q8NBR9 251 aa8.79□□□□□ -1
APTX-220ENST00000476858 FAM213BQ8TBF2 198 aa8.79□□□□□ -1
APTX-220ENST00000476858 C2CD4CQ8TF44 421 aa8.79□□□□□ -1
APTX-220ENST00000476858 GSN-AS1Q9NRJ2 163 aa8.79□□□□□ -1
APTX-220ENST00000476858 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
APTX-220ENST00000476858 IGHV4-4A0A075B6R2 117 aa8.78□□□□□ -1
APTX-220ENST00000476858 FAM74A7A6NL05 159 aa8.78□□□□□ -1
APTX-220ENST00000476858 PFDN1O60925 122 aa8.78□□□□□ -1
APTX-220ENST00000476858 LY6G6CO95867 125 aa8.78□□□□□ -1
APTX-220ENST00000476858 SEC11BP0C7V7 166 aa8.78□□□□□ -1
APTX-220ENST00000476858 NKX2-5P52952 324 aaPredicted RBP8.78□□□□□ -1
APTX-220ENST00000476858 DAD1P61803 113 aa8.78□□□□□ -1
APTX-220ENST00000476858 CCL20P78556 96 aa8.78□□□□□ -1
APTX-220ENST00000476858 CMTM2Q8TAZ6 248 aa8.78□□□□□ -1
APTX-220ENST00000476858 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
APTX-220ENST00000476858 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
APTX-220ENST00000476858 C16orf74Q96GX8 76 aa8.78□□□□□ -1
APTX-220ENST00000476858 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
APTX-220ENST00000476858 TMEM167BQ9NRX6 74 aa8.78□□□□□ -1
APTX-220ENST00000476858 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
APTX-220ENST00000476858 EPDR1Q9UM22 224 aa8.78□□□□□ -1
APTX-220ENST00000476858 KLK5Q9Y337 293 aaPredicted RBP8.78□□□□□ -1
APTX-220ENST00000476858 ATP5G3P48201 142 aa8.77□□□□□ -1.01
APTX-220ENST00000476858 Q6ZTI0 123 aa8.77□□□□□ -1.01
APTX-220ENST00000476858 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
APTX-220ENST00000476858 STOML3Q8TAV4 291 aa8.77□□□□□ -1.01
APTX-220ENST00000476858 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 A0A1W2PRE2 83 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 LYRM9A8MSI8 78 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 C11orf94C9JXX5 98 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 GAGE7O76087 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 NMBP08949 121 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 FAM74A1Q5RGS3 127 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 LINC00612Q8N6U2 182 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 TMEM75Q8N9X5 138 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 SFT2D1Q8WV19 159 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 MBD3L1Q8WWY6 194 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 PYGO2Q9BRQ0 406 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 MDFICQ9P1T7 246 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 PSG8Q9UQ74 426 aa8.76□□□□□ -1.01
APTX-220ENST00000476858 CBY3A6NI87 242 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 GNRH2O43555 120 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 PAGE4O60829 102 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 TPT1P13693 172 aaKnown RBP8.75□□□□□ -1.01
APTX-220ENST00000476858 HOXA5P20719 270 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 Q6AWC8 147 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 PRNTQ86SH4 94 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 CCDC28AQ8IWP9 274 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
APTX-220ENST00000476858 LINC00467Q9BRT7 94 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 TREM1Q9NP99 234 aa8.75□□□□□ -1.01
APTX-220ENST00000476858 TIMM8BQ9Y5J9 83 aaPredicted RBP8.75□□□□□ -1.01
APTX-220ENST00000476858 TRBV7-9A0A0J9YWB2 115 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 RGS13O14921 159 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 FLI1Q01543 452 aaPredicted RBP8.74□□□□□ -1.01
APTX-220ENST00000476858 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 ARL6IP6Q8N6S5 226 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 CYB561D1Q8N8Q1 229 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 MRPL16Q9NX20 251 aaKnown RBP8.74□□□□□ -1.01
APTX-220ENST00000476858 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
APTX-220ENST00000476858 PEX7O00628 323 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 IFNA7P01567 189 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 TMEM183BQ1AE95 376 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 ATG101Q9BSB4 218 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 LENEPQ9Y5L5 61 aa8.73□□□□□ -1.01
APTX-220ENST00000476858 TEX48A0A1B0GUV7 120 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 SNURFLB1AK76 121 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 UMAD1C9J7I0 102 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 F5H768 121 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 CRIP1P50238 77 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 TCL1AP56279 114 aa8.72□□□□□ -1.01
APTX-220ENST00000476858 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
APTX-220ENST00000476858 ZFP69Q49AA0 526 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms