RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 IGKV3-15P01624 115 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 CRPP02741 224 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 OR2T2Q6IF00 324 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 OR2T35Q8NGX2 323 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 DPY30Q9C005 99 aa3.41□□□□□ -1.86
NUP58-209ENST00000476553 BAZ1AQ9NRL2 1556 aaPredicted RBP3.41□□□□□ -1.86
NUP58-209ENST00000476553 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
NUP58-209ENST00000476553 E7EQL1 145 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 J3QLW9 94 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 GYPBP06028 91 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 ZNF345Q14585 488 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
NUP58-209ENST00000476553 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 TRPM6Q9BX84 2022 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 TEX14Q8IWB6 1497 aa3.4□□□□□ -1.87
NUP58-209ENST00000476553 KDM5AP29375 1690 aaKnown RBP3.39□□□□□ -1.87
NUP58-209ENST00000476553 USP54Q70EL1 1684 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 KIDINS220Q9ULH0 1771 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 EDF1O60869 148 aaKnown RBP3.39□□□□□ -1.87
NUP58-209ENST00000476553 PROSCO94903 275 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 NPC2P61916 151 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 KRTAP11-1Q8IUC1 163 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 MUCL1Q96DR8 90 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 CCDC88CQ9P219 2028 aa3.39□□□□□ -1.87
NUP58-209ENST00000476553 HELZP42694 1942 aaKnown RBP3.38□□□□□ -1.87
NUP58-209ENST00000476553 TRAV1-1A0A0B4J248 108 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 DSCR4P56555 118 aaPredicted RBP3.38□□□□□ -1.87
NUP58-209ENST00000476553 PYY3Q5JQD4 70 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 KLK12Q9UKR0 248 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 AP4S1Q9Y587 144 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 R4GN34 69 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 CPAMD8Q8IZJ3 1885 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 SPHKAPQ2M3C7 1700 aa3.38□□□□□ -1.87
NUP58-209ENST00000476553 WNK3Q9BYP7 1800 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 LOC107984156A0A0G2JMH3 177 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 FAM24AA6NFZ4 105 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 HMSDA8MTL9 139 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 IL5P05113 134 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 LINC00032P0C843 101 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 MIFP14174 115 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 C12orf73Q69YU5 71 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 ARL17AQ8IVW1 177 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 FAM19A2Q8N3H0 131 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 OR8B3Q8NGG8 313 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 LCN9Q8WX39 176 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 SPTSSAQ969W0 71 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 SMIM7Q9BQ49 75 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
NUP58-209ENST00000476553 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 A0A087WSZ3 146 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 TRAV40A0A0B4J280 105 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 E7EUB6 86 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 C5orf67F2Z3F1 127 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 ARPINQ7Z6K5 226 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 C10orf105Q8TEF2 133 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 VAMP8Q9BV40 100 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 MYLKQ15746 1914 aa3.36□□□□□ -1.87
NUP58-209ENST00000476553 MAGI1Q96QZ7 1491 aaPredicted RBP3.35□□□□□ -1.87
NUP58-209ENST00000476553 ARHGAP5Q13017 1502 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 IGLV2-18A0A075B6J9 118 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 IGLV3-16A0A075B6K0 115 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 MUC21A0A0G2JKD1 596 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 COLCA2A8K830 154 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 NDUFB6O95139 128 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 UBL3O95164 117 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 ZNF791Q3KP31 576 aaPredicted RBP3.35□□□□□ -1.87
NUP58-209ENST00000476553 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 PRO1933Q9H354 126 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 TMEM106BQ9NUM4 274 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 RBBP6Q7Z6E9 1792 aaKnown RBP3.35□□□□□ -1.87
NUP58-209ENST00000476553 FYCO1Q9BQS8 1478 aa3.35□□□□□ -1.87
NUP58-209ENST00000476553 SNCGO76070 127 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
NUP58-209ENST00000476553 SSR2P43308 183 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 TSKUQ8WUA8 353 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 PSORS1C2Q9UIG4 136 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 LINC00312Q9Y6C7 94 aa3.34□□□□□ -1.87
NUP58-209ENST00000476553 MCM3APO60318 1980 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 TRAV14DV4A0A0A6YYC5 116 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 ODF3BA8MYP8 253 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 H3BQF6 201 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 IGLC1P0CG04 106 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 SLC25A26Q70HW3 274 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 HMGN2P46Q86SG4 172 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
NUP58-209ENST00000476553 TMSB15BA0A087X1C1 80 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 PRB2P02812 416 aaPredicted RBP3.32□□□□□ -1.88
NUP58-209ENST00000476553 PIRTP0C851 137 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 ERHP84090 104 aaKnown RBP3.32□□□□□ -1.88
NUP58-209ENST00000476553 Q8N8P6 123 aa3.32□□□□□ -1.88
NUP58-209ENST00000476553 DYNLRB2Q8TF09 96 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms