RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 VGLL1Q99990 258 aa12.34□□□□□ -0.43
VARS2-207ENST00000476162 MAP1AP78559 2803 aaPredicted RBP12.33□□□□□ -0.43
VARS2-207ENST00000476162 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 Q8TAT8 98 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 PRR25Q96S07 402 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 NAA38Q9BRA0 125 aaKnown RBP12.33□□□□□ -0.44
VARS2-207ENST00000476162 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 IGHV3OR16-13A0A075B7E8 117 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 TRAV26-1A0A087WT03 109 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 IGHV3-74A0A0B4J1X5 117 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 CRYBA4P53673 196 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
VARS2-207ENST00000476162 SH2D1AO60880 128 aa12.32□□□□□ -0.44
VARS2-207ENST00000476162 CKS1BP61024 79 aa12.32□□□□□ -0.44
VARS2-207ENST00000476162 C19orf54Q5BKX5 351 aa12.32□□□□□ -0.44
VARS2-207ENST00000476162 MCRIP2Q9BUT9 160 aaKnown RBP12.32□□□□□ -0.44
VARS2-207ENST00000476162 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
VARS2-207ENST00000476162 TMSB15BA0A087X1C1 80 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 A0A1W2PPM0 123 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 SNAI2O43623 268 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
VARS2-207ENST00000476162 RIGQ13278 110 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 KIR3DS1Q14943 382 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 LY6EQ16553 131 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
VARS2-207ENST00000476162 SPCS1Q9Y6A9 102 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
VARS2-207ENST00000476162 MSMBP08118 114 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 RPL24P83731 157 aaKnown RBP12.31□□□□□ -0.44
VARS2-207ENST00000476162 COX8CQ7Z4L0 72 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 NRGNQ92686 78 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
VARS2-207ENST00000476162 GAGE12HA6NDE8 117 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 CRYBG3Q68DQ2 2970 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 FGF6P10767 208 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 ZNF80P51504 273 aaPredicted RBP12.3□□□□□ -0.44
VARS2-207ENST00000476162 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 Q6AWC8 147 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
VARS2-207ENST00000476162 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
VARS2-207ENST00000476162 PRAC2D3DTV9 90 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 H3BUX3 64 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 TRGV3P03979 118 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 CRIP2P52943 208 aaPredicted RBP12.29□□□□□ -0.44
VARS2-207ENST00000476162 METTL26Q96S19 204 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 MYO18BQ8IUG5 2567 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 UTP20O75691 2785 aaKnown RBP12.29□□□□□ -0.44
VARS2-207ENST00000476162 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 ERCC8Q13216 396 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
VARS2-207ENST00000476162 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
VARS2-207ENST00000476162 TCTEX1D4Q5JR98 221 aa12.28□□□□□ -0.44
VARS2-207ENST00000476162 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
VARS2-207ENST00000476162 HIF1ANQ9NWT6 349 aa12.28□□□□□ -0.44
VARS2-207ENST00000476162 PRB1P04280 392 aa12.27□□□□□ -0.44
VARS2-207ENST00000476162 GATD1Q8NB37 220 aa12.27□□□□□ -0.44
VARS2-207ENST00000476162 SPATA25Q9BR10 227 aa12.27□□□□□ -0.44
VARS2-207ENST00000476162 A0A1B0GW15 77 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 A6NDX4 124 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 AVPP01185 164 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 IGF1P05019 195 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 ZNF138P52744 262 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 RAB37Q96AX2 223 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 SLC50A1Q9BRV3 221 aa12.27□□□□□ -0.45
VARS2-207ENST00000476162 HSPB8Q9UJY1 196 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 U3KQE9 123 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 CSMD2Q7Z408 3487 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 ZFYVE26Q68DK2 2539 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 H0Y8G0 127 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 BLCAPP62952 87 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 FOXI2Q6ZQN5 318 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 DPF1Q92782 380 aa12.26□□□□□ -0.45
VARS2-207ENST00000476162 TRAV8-2A0A0B4J237 113 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 TMEM213A2RRL7 107 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 B4DSR2 109 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 IGHG2P01859 326 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 FABP2P12104 132 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
VARS2-207ENST00000476162 ARL3P36405 182 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 Q6ZS46 218 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 FA2HQ7L5A8 372 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■■■□ 20.4
VARS2-207ENST00000476162 CSN3P07498 182 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 C8orf86Q6ZUL3 223 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
VARS2-207ENST00000476162 ADAMTSL5Q6ZMM2 481 aa12.24□□□□□ -0.45
VARS2-207ENST00000476162 ZNF493Q6ZR52 646 aa12.24□□□□□ -0.45
VARS2-207ENST00000476162 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
VARS2-207ENST00000476162 RBAKDNA6NC62 111 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 ORM1P02763 201 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 UNQ9165/PRO28630Q6UXU0 137 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 IL17RELQ6ZVW7 336 aa12.23□□□□□ -0.45
VARS2-207ENST00000476162 BOD1L2Q8IYS8 172 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms