RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 AGPAT4-IT1Q9H0P7 198 aa12.75□□□□□ -0.37
TVP23B-202ENST00000476139 C20orf202A1L168 122 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
TVP23B-202ENST00000476139 FOXE3Q13461 319 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 WFDC3Q8IUB2 231 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 MRPS16Q9Y3D3 137 aaKnown RBP12.74□□□□□ -0.37
TVP23B-202ENST00000476139 U3KQE9 123 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 ABCA12Q86UK0 2595 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 UBR5O95071 2799 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-202ENST00000476139 Q6AWC8 147 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 Q6ZQT7 251 aa12.74□□□□□ -0.37
TVP23B-202ENST00000476139 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.37
TVP23B-202ENST00000476139 PF4V1P10720 104 aa12.73□□□□□ -0.37
TVP23B-202ENST00000476139 BMI1P35226 326 aa12.73□□□□□ -0.37
TVP23B-202ENST00000476139 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
TVP23B-202ENST00000476139 SIGLEC8Q9NYZ4 499 aa12.73□□□□□ -0.37
TVP23B-202ENST00000476139 GAS8-AS1O95177 125 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 TMEM95Q3KNT9 176 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 HSPB8Q9UJY1 196 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 HSBP1L1C9JCN9 74 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 NUDT3O95989 172 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 FABP5P3A8MUU1 101 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
TVP23B-202ENST00000476139 ZNF493Q6ZR52 646 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 FER1L6-AS1Q8NA97 138 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
TVP23B-202ENST00000476139 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
TVP23B-202ENST00000476139 GATD1Q8NB37 220 aa12.71□□□□□ -0.37
TVP23B-202ENST00000476139 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.37
TVP23B-202ENST00000476139 FBLL1A6NHQ2 334 aaKnown RBP12.71□□□□□ -0.38
TVP23B-202ENST00000476139 A0A096LNJ9 63 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 A0A1B0GW15 77 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 DEFB1P60022 68 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 GAGE1Q13065 139 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 C11orf21Q9P2W6 132 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 ZNF469Q96JG9 3925 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-202ENST00000476139 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 CKS2P33552 79 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 SLC25A34Q6PIV7 304 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 PET117Q6UWS5 81 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 OR4X2Q8NGF9 303 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 C20orf173Q96LM9 149 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 ST20Q9HBF5 79 aa12.7□□□□□ -0.38
TVP23B-202ENST00000476139 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 IGHV4-59P01825 116 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 RBAKDNA6NC62 111 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 NPYP01303 97 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 DEFB112Q30KQ8 113 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 GPHB5Q86YW7 130 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 CCL25O15444 150 aa12.69□□□□□ -0.38
TVP23B-202ENST00000476139 TGFAP01135 160 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 PTTG1IPP53801 180 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 KRTAP10-9P60411 292 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
TVP23B-202ENST00000476139 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 ZNF843Q8N446 348 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 TEX15Q9BXT5 2789 aa12.68□□□□□ -0.38
TVP23B-202ENST00000476139 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 NBPF19A0A087WUL8 3843 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 GATA1P15976 413 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-202ENST00000476139 EDN2P20800 178 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 EVI2AP22794 236 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 USMG5Q96IX5 58 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 ATP6V0BQ99437 205 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 SCRT2Q9NQ03 307 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 A0A096LNT2 108 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 J3KRW8 73 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 NDUFA4O00483 81 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 IGLV1-40P01703 118 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 C18orf15Q96N68 181 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 NAV2Q8IVL1 2488 aa12.67□□□□□ -0.38
TVP23B-202ENST00000476139 FOSL1P15407 271 aa12.66□□□□□ -0.38
TVP23B-202ENST00000476139 RPS20P60866 119 aaKnown RBP12.66□□□□□ -0.38
TVP23B-202ENST00000476139 COX6B1P14854 86 aa12.66□□□□□ -0.38
TVP23B-202ENST00000476139 DSCR9P59020 149 aa12.66□□□□□ -0.38
TVP23B-202ENST00000476139 LINC01356Q8N9X3 169 aa12.66□□□□□ -0.38
TVP23B-202ENST00000476139 CACNG7P62955 275 aa12.66□□□□□ -0.38
TVP23B-202ENST00000476139 CBY3A6NI87 242 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 LINC01559Q495D7 138 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 U3KQK5 164 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 SLC25A16P16260 332 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 SRD5A1P18405 259 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 ANKRD39Q53RE8 183 aa12.65□□□□□ -0.38
TVP23B-202ENST00000476139 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms