RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 RNF125Q96EQ8 232 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 RNF185Q96GF1 192 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 SGK494Q96LW2 274 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 PRR25Q96S07 402 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 RASL11BQ9BPW5 248 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 FBXL15Q9H469 300 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 SIGLEC8Q9NYZ4 499 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 HIGD1BQ9P298 99 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 SMAD5-AS1Q9Y6J3 95 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 ARFGEF3Q5TH69 2177 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 ACANP16112 2415 aa5.31□□□□□ -1.56
UBR4-212ENST00000475973 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 MAP1AP78559 2803 aaPredicted RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 IGHV4-4A0A075B6R2 117 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 TRAV8-6A0A0B4J262 113 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 PPIAL4CA0A0B4J2A2 164 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 IGHV4-61A0A0C4DH41 118 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 MUC21A0A0G2JKD1 596 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 MUC21A0A140T8X8 626 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 RBAKDNA6NC62 111 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 K7EQM0 130 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 PPIAL4GP0DN37 164 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 EGR2P11161 476 aaPredicted RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 PRTN3P24158 256 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 HTR1DP28221 377 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 ZNF138P52744 262 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 LYZP61626 148 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 PSG9Q00887 426 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 SCGB2A2Q13296 93 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 C5orf64Q2M2E5 130 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 MRPL51Q4U2R6 128 aaKnown RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 TMEM97Q5BJF2 176 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 MUC21Q5SSG8 566 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 LHFPL4Q7Z7J7 247 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 BCL6BQ8N143 479 aaPredicted RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 ATP6V0BQ99437 205 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 DPM3Q9P2X0 92 aa5.3□□□□□ -1.56
UBR4-212ENST00000475973 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
UBR4-212ENST00000475973 MALRD1Q5VYJ5 2156 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 C9orf118A6NHY6 69 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 HSBP1L1C9JCN9 74 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 H3BTX0 84 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 M0R3E3 92 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 TIMM23O14925 209 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 NBR2O15453 112 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 ENSAO43768 121 aaKnown RBP5.29□□□□□ -1.56
UBR4-212ENST00000475973 SH2D1AO60880 128 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 TOX4O94842 621 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 TGFAP01135 160 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 CTSGP08311 255 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 FAM106CPP0CH98 169 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 IFI27P40305 119 aaPredicted RBP5.29□□□□□ -1.56
UBR4-212ENST00000475973 PCP4P48539 62 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 ARF6P62330 175 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 FAM106AQ4KMX7 169 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 LYZL1Q6UWQ5 148 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 ORMDL3Q8N138 153 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 TEX29Q8N6K0 151 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 MRPL53Q96EL3 112 aaKnown RBP5.29□□□□□ -1.56
UBR4-212ENST00000475973 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 CST9LQ9H4G1 147 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 PEF1Q9UBV8 284 aaKnown RBP5.29□□□□□ -1.56
UBR4-212ENST00000475973 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 HHLA3Q9XRX5 114 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 PLXNB1O43157 2135 aa5.29□□□□□ -1.56
UBR4-212ENST00000475973 CENPVL3A0A0U1RRI6 287 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 TMEM189A5PLL7 270 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 OR2T8A6NH00 312 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 LINC01619G3V211 115 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 HBDP02042 147 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 RPL7P18124 248 aaKnown RBP5.28□□□□□ -1.56
UBR4-212ENST00000475973 ZNF80P51504 273 aaPredicted RBP5.28□□□□□ -1.56
UBR4-212ENST00000475973 MFAP4P55083 255 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 HSD52Q0P140 79 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 PLGLAQ15195 96 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 OCIAD2Q56VL3 154 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 AMMECR1LQ6DCA0 310 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 IL17RELQ6ZVW7 336 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 FA2HQ7L5A8 372 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 NEGR1Q7Z3B1 354 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 RPEQ96AT9 228 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 PRELID3AQ96N28 172 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 RABAC1Q9UI14 185 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
UBR4-212ENST00000475973 IGHV3-21A0A0B4J1V1 117 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 TMEM213A2RRL7 107 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 C7orf71A4D174 169 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 B4DSR2 109 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 D6R8Y8 96 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 BRI3O95415 125 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 IL4P05112 153 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 EVI2AP22794 236 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 FCER1GP30273 86 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 BMI1P35226 326 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 RAB9AP51151 201 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms