RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 RNASE3P12724 160 aaKnown RBP2.23□□□□□ -2.05
SMC5-203ENST00000475540 FAM74A1Q5RGS3 127 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 TEX261Q6UWH6 196 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 FOXI2Q6ZQN5 318 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 Q6ZRN7 208 aaPredicted RBP2.23□□□□□ -2.05
SMC5-203ENST00000475540 PATE1Q8WXA2 126 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 CCDC167Q9P0B6 97 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 ORMDL1Q9P0S3 153 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 KLK9Q9UKQ9 250 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 SORL1Q92673 2214 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 MICAL3Q7RTP6 2002 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 RP1P56715 2156 aa2.23□□□□□ -2.05
SMC5-203ENST00000475540 ZFC3H1O60293 1989 aaKnown RBP2.23□□□□□ -2.05
SMC5-203ENST00000475540 TANC2Q9HCD6 1990 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 LOC107984156A0A0G2JMH3 177 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 CDC42EP2O14613 210 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 WHAMMP3Q1A5X7 153 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 ARL17AQ8IVW1 177 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 TMEM203Q969S6 136 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 LINC00052Q96N35 136 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 LSM2Q9Y333 95 aaKnown RBP2.22□□□□□ -2.05
SMC5-203ENST00000475540 LAMB2P55268 1798 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 RGS12O14924 1447 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 PTPRGP23470 1445 aa2.22□□□□□ -2.05
SMC5-203ENST00000475540 ICE1Q9Y2F5 2266 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 UHRF1BP1LA0JNW5 1464 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 WDR97A6NE52 1622 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 LAMB4A4D0S4 1761 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 DIDO1Q9BTC0 2240 aaKnown RBP2.21□□□□□ -2.06
SMC5-203ENST00000475540 F8W1H4 67 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 CCL16O15467 120 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 COX7CP15954 63 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 SCIMPQ6UWF3 145 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 FGD6Q6ZV73 1430 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 REG4Q9BYZ8 158 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 CACNA1AO00555 2505 aa2.21□□□□□ -2.06
SMC5-203ENST00000475540 EIF4G3O43432 1585 aaKnown RBP2.2□□□□□ -2.06
SMC5-203ENST00000475540 A0A0G2JMM0 328 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 A0A1W2PPB8 328 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 A6NN06 94 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 KIR3DP1A8MWS1 328 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 S100A1P23297 94 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 DEFB103AP81534 67 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 ZCCHC23Q6ZST2 131 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 Q8N2B8 174 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 MED9Q9NWA0 146 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 MYH1P12882 1939 aa2.2□□□□□ -2.06
SMC5-203ENST00000475540 FN1P02751 2386 aaKnown RBP2.2□□□□□ -2.06
SMC5-203ENST00000475540 NAIPQ13075 1403 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 BBIP1A8MTZ0 92 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 MIF4GDA9UHW6 222 aaKnown RBP2.19□□□□□ -2.06
SMC5-203ENST00000475540 H3BRM9 83 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 M0R2P5 195 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 APODP05090 189 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 PYYP10082 97 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.19□□□□□ -2.06
SMC5-203ENST00000475540 ATP6V0E2Q8NHE4 81 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 NALCNQ8IZF0 1738 aa2.19□□□□□ -2.06
SMC5-203ENST00000475540 SCN3AQ9NY46 2000 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 PHLPP1O60346 1717 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 MRPS14O60783 128 aaKnown RBP2.18□□□□□ -2.06
SMC5-203ENST00000475540 IGF2P01344 180 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 IFNGP01579 166 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 SDF2Q99470 211 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 NOP16Q9Y3C1 178 aaKnown RBP2.18□□□□□ -2.06
SMC5-203ENST00000475540 BCL9LQ86UU0 1499 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 PLXNA4Q9HCM2 1894 aa2.18□□□□□ -2.06
SMC5-203ENST00000475540 CACNA1GO43497 2377 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 FAM135AQ9P2D6 1515 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.17□□□□□ -2.06
SMC5-203ENST00000475540 M0R129 80 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 IGHV3-33P01772 117 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 SNX29P2Q8IUI4 249 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 TCTEX1D1Q8N7M0 179 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 NAA38Q9BRA0 125 aaKnown RBP2.17□□□□□ -2.06
SMC5-203ENST00000475540 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 TAS2R8Q9NYW2 309 aa2.17□□□□□ -2.06
SMC5-203ENST00000475540 RIMS1Q86UR5 1692 aaKnown RBP2.17□□□□□ -2.06
SMC5-203ENST00000475540 CECR2Q9BXF3 1484 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 J3QLW9 94 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 FREM3P0C091 2139 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 ADCYAP1P18509 176 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 MPV17LQ2QL34 196 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 LINC01545Q5VT33 79 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 MED12LQ86YW9 2145 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 KCNRGQ8N5I3 272 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 C5orf17Q8NAS9 161 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 PSMG3Q9BT73 122 aaPredicted RBP2.16□□□□□ -2.06
SMC5-203ENST00000475540 KIAA1549Q9HCM3 1950 aa2.16□□□□□ -2.06
SMC5-203ENST00000475540 KIAA1549LQ6ZVL6 1849 aa2.15□□□□□ -2.06
SMC5-203ENST00000475540 SPEF2Q9C093 1822 aa2.15□□□□□ -2.06
SMC5-203ENST00000475540 GEMIN2O14893 280 aaKnown RBP2.15□□□□□ -2.07
SMC5-203ENST00000475540 NUPR1O60356 82 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms