RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ACOT6Q3I5F7 207 aaPredicted RBP6.6□□□□□ -1.35
PDPN-204ENST00000475043 Q6ZTI0 123 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 LYPD1Q8N2G4 141 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 ZFAND2AQ8N6M9 145 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 LINC00612Q8N6U2 182 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 TRGV1A0A0A0MS02 117 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 PRSS29PA6NIE9 313 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 RTL8CO15255 209 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 HMGB3O15347 200 aaKnown RBP6.59□□□□□ -1.35
PDPN-204ENST00000475043 M6PRP20645 277 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 HOXA5P20719 270 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 FAM3BP58499 235 aaPredicted RBP6.59□□□□□ -1.35
PDPN-204ENST00000475043 RAB2AP61019 212 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
PDPN-204ENST00000475043 ZNF266Q14584 549 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 SOHLH1Q5JUK2 328 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 FAM74A1Q5RGS3 127 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 PRR9Q5T870 116 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 HSD17B11Q8NBQ5 300 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 C11orf72Q8NBR9 251 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 OR10G9Q8NGN4 311 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 OR10G7Q8NGN6 311 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 CMTM2Q8TAZ6 248 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 RXFP4Q8TDU9 374 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 TP53TG3Q9ULZ0 132 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 KLF12Q9Y4X4 402 aa6.59□□□□□ -1.35
PDPN-204ENST00000475043 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.36
PDPN-204ENST00000475043 IGHV1OR15-1A0A075B7D0 117 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 PGPA6NDG6 321 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 DIRC3C9JPN6 131 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 MUC21Q5SSG8 566 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 PQLC2Q6ZP29 291 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 Q6ZQT7 251 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 Q6ZR54 194 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
PDPN-204ENST00000475043 TRBV7-9A0A0J9YWB2 115 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 CDC34P49427 236 aaPredicted RBP6.57□□□□□ -1.36
PDPN-204ENST00000475043 TCL1AP56279 114 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
PDPN-204ENST00000475043 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 INO80EQ8NBZ0 244 aaPredicted RBP6.57□□□□□ -1.36
PDPN-204ENST00000475043 ZNRF2Q8NHG8 242 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 AQP10Q96PS8 301 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 MRPL16Q9NX20 251 aaKnown RBP6.57□□□□□ -1.36
PDPN-204ENST00000475043 LINC00588Q9Y4M8 146 aa6.57□□□□□ -1.36
PDPN-204ENST00000475043 SPINK4O60575 86 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 IGHV3-53P01767 116 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 GIPP09681 153 aaPredicted RBP6.56□□□□□ -1.36
PDPN-204ENST00000475043 ARL14EPLP0DKL9 152 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 Q5BKY6 102 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 GOLT1AQ6ZVE7 132 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 NAGKQ9UJ70 344 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
PDPN-204ENST00000475043 FXYD6-FXYD2A0A087WZ82 144 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 H3BNG1 76 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 H3BS24 57 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 MBP02144 154 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 GNG5P63218 68 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 OR2G3Q8NGZ4 309 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 ASB13Q8WXK3 278 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 PSMG3Q9BT73 122 aaPredicted RBP6.55□□□□□ -1.36
PDPN-204ENST00000475043 SH3BGRL3Q9H299 93 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 Q9H8V8 135 aa6.55□□□□□ -1.36
PDPN-204ENST00000475043 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 BORCS7-ASMTA0A0B4J1R7 106 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 STAG3L2P0CL84 134 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 STAG3L3P0CL85 134 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 SERF2P84101 59 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 ESRGQ1W209 222 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 RGS21Q2M5E4 152 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 Q6AWC8 147 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 IQCF2Q8IXL9 164 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 OR2T35Q8NGX2 323 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 TMED6Q8WW62 240 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 VSIG2Q96IQ7 327 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 ST6GAL2Q96JF0 529 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 SGK494Q96LW2 274 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 ACTR3CQ9C0K3 210 aaPredicted RBP6.54□□□□□ -1.36
PDPN-204ENST00000475043 TREM1Q9NP99 234 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 MDFICQ9P1T7 246 aa6.54□□□□□ -1.36
PDPN-204ENST00000475043 DNAH10Q8IVF4 4471 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms