RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FAM231BA6NCW3 169 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 FOXA3P55318 350 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-207ENST00000474825 RPL11P62913 178 aaKnown RBP4.93□□□□□ -1.62
ATG4A-207ENST00000474825 NSUN5P1Q3KNT7 163 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-207ENST00000474825 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
ATG4A-207ENST00000474825 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 OR4B1Q8NGF8 309 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 OR8A1Q8NGG7 326 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 ZC2HC1AQ96GY0 325 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 SGK494Q96LW2 274 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 IL36BQ9NZH7 164 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 RPH3ALQ9UNE2 315 aa4.93□□□□□ -1.62
ATG4A-207ENST00000474825 A0A0J9YX75 114 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 TYMSP04818 313 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 CT45A10P0DMU9 189 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 INSL3P51460 131 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 ERVFC1-1P60608 527 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 SNRPD3P62318 126 aaKnown RBP4.92□□□□□ -1.62
ATG4A-207ENST00000474825 ERCC8Q13216 396 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF124Q15973 351 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 SMUG1Q53HV7 270 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 TMEM78Q5T7P6 136 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 RBPMS2Q6ZRY4 209 aaKnown RBP4.92□□□□□ -1.62
ATG4A-207ENST00000474825 GBGT1Q8N5D6 347 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 ZFAND2AQ8N6M9 145 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 NHLRC2Q8NBF2 726 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF738Q8NE65 137 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 OR10J6PQ8NGY7 276 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 DYNLRB2Q8TF09 96 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 GPR61Q9BZJ8 451 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 GFRA4Q9GZZ7 299 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 RNASE7Q9H1E1 156 aaKnown RBP4.92□□□□□ -1.62
ATG4A-207ENST00000474825 SAV1Q9H4B6 383 aaPredicted RBP4.92□□□□□ -1.62
ATG4A-207ENST00000474825 VWFP04275 2813 aa4.92□□□□□ -1.62
ATG4A-207ENST00000474825 IZUMO1RA6ND01 250 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 FABP5P3A8MUU1 101 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 KLLNB2CW77 178 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 GATCO43716 136 aaKnown RBP4.91□□□□□ -1.62
ATG4A-207ENST00000474825 CXCL1P09341 107 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF688P0C7X2 276 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 MGST1P10620 155 aaKnown RBP4.91□□□□□ -1.62
ATG4A-207ENST00000474825 ZNF80P51504 273 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-207ENST00000474825 CMC4P56277 68 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-207ENST00000474825 HIST1H1AQ02539 215 aaPredicted RBP4.91□□□□□ -1.62
ATG4A-207ENST00000474825 FAM162BQ5T6X4 162 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 AMTNQ6UX39 209 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 Q8TAT8 98 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 TSKUQ8WUA8 353 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 BTF3L4Q96K17 158 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 C8orf49Q96NF6 230 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 NDFIP1Q9BT67 221 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 MAP6D1Q9H9H5 199 aa4.91□□□□□ -1.62
ATG4A-207ENST00000474825 IGKV3-7A0A075B6H7 116 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 A8MWL6 223 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 F6UB75 175 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 H3BMM0 161 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 PHOX2AO14813 284 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 SH2D1AO60880 128 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 DUSP14O95147 198 aaKnown RBP4.9□□□□□ -1.63
ATG4A-207ENST00000474825 P01737 135 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 HLA-DRB4P13762 266 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 S100PP25815 95 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 DEFB1P60022 68 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 PSMG4Q5JS54 123 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 GDF5OSQ5U4N7 250 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 Q6AWC8 147 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 KCNIP4Q6PIL6 250 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 WFDC3Q8IUB2 231 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 ASCL2Q99929 193 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 RPP21Q9H633 154 aaKnown RBP4.9□□□□□ -1.63
ATG4A-207ENST00000474825 C19orf73Q9NVV2 129 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 SELENOKQ9Y6D0 94 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.9□□□□□ -1.63
ATG4A-207ENST00000474825 HLA-DRB4X5D2U9 266 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 STAB1Q9NY15 2570 aa4.9□□□□□ -1.63
ATG4A-207ENST00000474825 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 WNK1Q9H4A3 2382 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 TGIF2-C20orf24A0A0A6YYL0 155 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 ZNF705GA8MUZ8 300 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 ZNF324O75467 553 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 PF4P02776 101 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 ZNF705DP0CH99 300 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 ZNF705BP0CI00 300 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 RAB5AP20339 215 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 TFPI2P48307 235 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 DEFB131AP59861 70 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 RPS20P60866 119 aaKnown RBP4.89□□□□□ -1.63
ATG4A-207ENST00000474825 DNLZQ5SXM8 178 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 PRR9Q5T870 116 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 C9orf66Q5T8R8 295 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 PRR27Q6MZM9 219 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 EBLN2Q6P2I7 272 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 RASL11AQ6T310 242 aa4.89□□□□□ -1.63
ATG4A-207ENST00000474825 GATD1Q8NB37 220 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms