RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 Q6ZWC4 215 aa13.52□□□□□ -0.25
CACFD1-204ENST00000474734 IGF2BP2-AS1Q96M15 143 aa13.52□□□□□ -0.25
CACFD1-204ENST00000474734 TREM1Q9NP99 234 aa13.52□□□□□ -0.25
CACFD1-204ENST00000474734 XCL2Q9UBD3 114 aa13.52□□□□□ -0.25
CACFD1-204ENST00000474734 STARD9Q9P2P6 4700 aa13.52□□□□□ -0.25
CACFD1-204ENST00000474734 KLLNB2CW77 178 aa13.51□□□□□ -0.25
CACFD1-204ENST00000474734 LTAP01374 205 aa13.51□□□□□ -0.25
CACFD1-204ENST00000474734 GPX1P07203 203 aa13.51□□□□□ -0.25
CACFD1-204ENST00000474734 C20orf144Q9BQM9 153 aa13.51□□□□□ -0.25
CACFD1-204ENST00000474734 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
CACFD1-204ENST00000474734 SRP19P09132 144 aaKnown RBP13.5□□□□□ -0.25
CACFD1-204ENST00000474734 GIG44P09565 113 aaPredicted RBP13.5□□□□□ -0.25
CACFD1-204ENST00000474734 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
CACFD1-204ENST00000474734 C7orf71A4D174 169 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 LINC00862A6NCI5 91 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 CRXO43186 299 aaPredicted RBP13.49□□□□□ -0.25
CACFD1-204ENST00000474734 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 SMIM12Q96EX1 92 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 DERL1Q9BUN8 251 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 PARLQ9H300 379 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
CACFD1-204ENST00000474734 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 J3KRW8 73 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 GNG4P50150 75 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 CEBPGP53567 150 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
CACFD1-204ENST00000474734 GFI1BQ5VTD9 330 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 BAGE2Q86Y30 109 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 TMEM183AQ8IXX5 376 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 TMEM256Q8N2U0 113 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 TVP23CQ96ET8 276 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
CACFD1-204ENST00000474734 C9JCJ5 164 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 RNASE4P34096 147 aaKnown RBP13.47□□□□□ -0.25
CACFD1-204ENST00000474734 ZNF674Q2M3X9 581 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 DEFB135Q30KP9 77 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 COX8CQ7Z4L0 72 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 CSNK1G2-AS1Q8NCQ2 148 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 EDA2RQ9HAV5 297 aa13.47□□□□□ -0.25
CACFD1-204ENST00000474734 FAM74A3Q4VXF1 159 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 Q6AWC8 147 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 EIF4E3Q8N5X7 224 aaKnown RBP13.46□□□□□ -0.25
CACFD1-204ENST00000474734 RNF183Q96D59 192 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 C8orf49Q96NF6 230 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 SMIM7Q9BQ49 75 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 TMEM208Q9BTX3 173 aa13.46□□□□□ -0.25
CACFD1-204ENST00000474734 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 C9JQL5 133 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 SPRY2O43597 315 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 GCGP01275 180 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 PRR9Q5T870 116 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 BIN3Q9NQY0 253 aa13.45□□□□□ -0.26
CACFD1-204ENST00000474734 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
CACFD1-204ENST00000474734 H7BYZ3 331 aa13.44□□□□□ -0.26
CACFD1-204ENST00000474734 SOHLH1Q5JUK2 328 aa13.44□□□□□ -0.26
CACFD1-204ENST00000474734 ZNF705AQ6ZN79 300 aaPredicted RBP13.44□□□□□ -0.26
CACFD1-204ENST00000474734 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
CACFD1-204ENST00000474734 LY96Q9Y6Y9 160 aa13.44□□□□□ -0.26
CACFD1-204ENST00000474734 CSMD3Q7Z407 3707 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 TRBV20OR9-2A0A075B6H5 130 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 PFN1P07737 140 aaKnown RBP13.43□□□□□ -0.26
CACFD1-204ENST00000474734 C1orf158Q8N1D5 194 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 ZC2HC1AQ96GY0 325 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 LINC01587Q99440 93 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 PYGO2Q9BRQ0 406 aa13.43□□□□□ -0.26
CACFD1-204ENST00000474734 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
CACFD1-204ENST00000474734 SFTA3P0C7M3 94 aa13.42□□□□□ -0.26
CACFD1-204ENST00000474734 FAM162BQ5T6X4 162 aa13.42□□□□□ -0.26
CACFD1-204ENST00000474734 NHLRC2Q8NBF2 726 aa13.42□□□□□ -0.26
CACFD1-204ENST00000474734 EPPK1P58107 5090 aaKnown RBP13.42□□□□□ -0.26
CACFD1-204ENST00000474734 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 SMIM9A6NGZ8 99 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 FABP5P3A8MUU1 101 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 RBMY1A1P0DJD3 496 aaKnown RBP13.41□□□□□ -0.26
CACFD1-204ENST00000474734 RBMY1CP0DJD4 496 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 MGST1P10620 155 aaKnown RBP13.41□□□□□ -0.26
CACFD1-204ENST00000474734 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
CACFD1-204ENST00000474734 OR11H2Q8NH07 326 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 NEU1Q99519 415 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 OVOL2Q9BRP0 275 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 LYSTQ99698 3801 aa13.41□□□□□ -0.26
CACFD1-204ENST00000474734 IGLV2-8P01709 118 aa13.4□□□□□ -0.26
CACFD1-204ENST00000474734 ZNF80P51504 273 aaPredicted RBP13.4□□□□□ -0.26
CACFD1-204ENST00000474734 LINC00467Q9BRT7 94 aa13.4□□□□□ -0.26
CACFD1-204ENST00000474734 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.26
CACFD1-204ENST00000474734 IGHV1OR15-1A0A075B7D0 117 aa13.39□□□□□ -0.27
CACFD1-204ENST00000474734 TMEM241Q24JQ0 296 aa13.39□□□□□ -0.27
CACFD1-204ENST00000474734 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
CACFD1-204ENST00000474734 NAT8Q9UHE5 227 aa13.39□□□□□ -0.27
CACFD1-204ENST00000474734 PGPEP1LA6NFU8 196 aa13.38□□□□□ -0.27
CACFD1-204ENST00000474734 SH2D1AO60880 128 aa13.38□□□□□ -0.27
CACFD1-204ENST00000474734 MIFP14174 115 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms