RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 UQCC3Q6UW78 93 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 BAGE2Q86Y30 109 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 KIR2DL5AQ8N109 375 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 CSNK1G2-AS1Q8NCQ2 148 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 C8orf49Q96NF6 230 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 PARLQ9H300 379 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
COL8A1-206ENST00000474648 DNAH9Q9NYC9 4486 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 NBEAL2Q6ZNJ1 2754 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 TRAV12-2A0A075B6T6 113 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 TSPOP30536 169 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 CDKN1BP46527 198 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 CRIP1P50238 77 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 ZNF80P51504 273 aaPredicted RBP7.3□□□□□ -1.24
COL8A1-206ENST00000474648 CEBPGP53567 150 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 ZNF674Q2M3X9 581 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 CENPWQ5EE01 88 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 Q6ZQT7 251 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 TMEM183AQ8IXX5 376 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 XCL2Q9UBD3 114 aa7.3□□□□□ -1.24
COL8A1-206ENST00000474648 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 PGPEP1LA6NFU8 196 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 C9JCJ5 164 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 J3KRW8 73 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 UBE2CO00762 179 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
COL8A1-206ENST00000474648 AMBPP02760 352 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 SFTA3P0C7M3 94 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
COL8A1-206ENST00000474648 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
COL8A1-206ENST00000474648 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
COL8A1-206ENST00000474648 DEFA6Q01524 100 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
COL8A1-206ENST00000474648 SOHLH1Q5JUK2 328 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 GFI1BQ5VTD9 330 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 C1orf158Q8N1D5 194 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 NHLRC2Q8NBF2 726 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 OCC1Q8TAD7 63 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 ZC2HC1AQ96GY0 325 aa7.29□□□□□ -1.24
COL8A1-206ENST00000474648 C7orf71A4D174 169 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 ZNF727A8MUV8 499 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 CA1P00915 261 aaPredicted RBP7.28□□□□□ -1.24
COL8A1-206ENST00000474648 GPX1P07203 203 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 GNG4P50150 75 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 APOC4P55056 127 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 BTN1A1Q13410 526 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 FAM74A3Q4VXF1 159 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 SMUG1Q53HV7 270 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 Q6AWC8 147 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 SBSPONQ8IVN8 264 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 MRAPQ8TCY5 172 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 SMIM7Q9BQ49 75 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
COL8A1-206ENST00000474648 TRAV12-3A0A0B4J271 114 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 K7EN84 100 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 GCGP01275 180 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 ADCYAP1P18509 176 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 TMEM241Q24JQ0 296 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 SMIM12Q96EX1 92 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 C1QTNF4Q9BXJ3 329 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 C11orf21Q9P2W6 132 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 LY96Q9Y6Y9 160 aa7.27□□□□□ -1.25
COL8A1-206ENST00000474648 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
COL8A1-206ENST00000474648 HUWE1Q7Z6Z7 4374 aaKnown RBP7.26□□□□□ -1.25
COL8A1-206ENST00000474648 INSP01308 110 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
COL8A1-206ENST00000474648 OR5I1Q13606 314 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 NDUFA5Q16718 116 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 C10orf91Q5T1B1 145 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 ZNF705AQ6ZN79 300 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-206ENST00000474648 Q6ZWC4 215 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 LINC01551Q86U37 167 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 RNF183Q96D59 192 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 C20orf144Q9BQM9 153 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 SDF2L1Q9HCN8 221 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 NAT8Q9UHE5 227 aa7.26□□□□□ -1.25
COL8A1-206ENST00000474648 FBN3Q75N90 2809 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 TRAV21A0A0B4J279 112 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 C19orf71A6NCJ1 209 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 FABP5P3A8MUU1 101 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 SH2D1AO60880 128 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 PRM2P04554 102 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 MGST1P10620 155 aaKnown RBP7.25□□□□□ -1.25
COL8A1-206ENST00000474648 RPL23P62829 140 aaKnown RBP7.25□□□□□ -1.25
COL8A1-206ENST00000474648 DEFB135Q30KP9 77 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
COL8A1-206ENST00000474648 IGKV3D-20A0A0C4DH25 116 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 F8W036 122 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 SPRY2O43597 315 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 FAM162BQ5T6X4 162 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 PRR27Q6MZM9 219 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 RCHY1Q96PM5 261 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 LINC01587Q99440 93 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 B9D2Q9BPU9 175 aa7.24□□□□□ -1.25
COL8A1-206ENST00000474648 TM2D3Q9BRN9 247 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms