RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 BTF3L4Q96K17 158 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 SETD2Q9BYW2 2564 aaPredicted RBP7.68□□□□□ -1.18
COL12A1-206ENST00000474564 LOC102724200A0A096LPH7 203 aaPredicted RBP7.68□□□□□ -1.18
COL12A1-206ENST00000474564 A0A1W2PPQ1 181 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 XKRY2A2RUG3 117 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 GCGP01275 180 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 CDKN1BP46527 198 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 SAMD5Q5TGI4 173 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 SRD5A3Q9H8P0 318 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 TMEM242Q9NWH2 141 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 ATRQ13535 2644 aa7.68□□□□□ -1.18
COL12A1-206ENST00000474564 CUBNO60494 3623 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 TRAV21A0A0B4J279 112 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 G3V4G9 280 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 K7EN84 100 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 RNASE4P34096 147 aaKnown RBP7.67□□□□□ -1.18
COL12A1-206ENST00000474564 FAM162BQ5T6X4 162 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 DEFB125Q8N687 156 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 Q8TAT8 98 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
COL12A1-206ENST00000474564 RNASE7Q9H1E1 156 aaKnown RBP7.67□□□□□ -1.18
COL12A1-206ENST00000474564 INSP01308 110 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 IGLV2-11P01706 119 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 CRISP2P16562 243 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
COL12A1-206ENST00000474564 RPS10P46783 165 aaKnown RBP7.66□□□□□ -1.18
COL12A1-206ENST00000474564 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 TRPT1Q86TN4 253 aaKnown RBP7.66□□□□□ -1.18
COL12A1-206ENST00000474564 BORCS7Q96B45 105 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 C20orf144Q9BQM9 153 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 CSTL1Q9H114 145 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 RPP21Q9H633 154 aaKnown RBP7.66□□□□□ -1.18
COL12A1-206ENST00000474564 IL36BQ9NZH7 164 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 GOLT1BQ9Y3E0 138 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 WNK1Q9H4A3 2382 aa7.66□□□□□ -1.18
COL12A1-206ENST00000474564 KIR2DL5BA0A0G2JN68 375 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 KIR2DL5BA0A0G2JPC4 375 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 C7orf71A4D174 169 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 J3KRW8 73 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 UBE2CO00762 179 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 IGLV2-8P01709 118 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 DEFB1P60022 68 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 RPS20P60866 119 aaKnown RBP7.65□□□□□ -1.18
COL12A1-206ENST00000474564 SPINK13Q1W4C9 94 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 FAM159AQ6UWV7 190 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 KIR2DL5AQ8N109 375 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 TMEM256Q8N2U0 113 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 OR2D3Q8NGH3 330 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 KIR2DL5BQ8NHK3 375 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 KCNS1Q96KK3 526 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 C8orf49Q96NF6 230 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 IMMP2LQ96T52 175 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
COL12A1-206ENST00000474564 FBN1P35555 2871 aaKnown RBP7.64□□□□□ -1.19
COL12A1-206ENST00000474564 TGIF2-C20orf24A0A0A6YYL0 155 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 A8MTW9 85 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 A8MWL6 223 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 CA1P00915 261 aaPredicted RBP7.64□□□□□ -1.19
COL12A1-206ENST00000474564 ORM1P02763 201 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 PFN1P07737 140 aaKnown RBP7.64□□□□□ -1.19
COL12A1-206ENST00000474564 RAB5AP20339 215 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 TCL1AP56279 114 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 ELOBQ15370 118 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 ZNF124Q15973 351 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 DEFB121Q5J5C9 76 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 Q8N1Y9 231 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 NUDT10Q8NFP7 164 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 NUDT11Q96G61 164 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 ZC2HC1AQ96GY0 325 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 FAM210BQ96KR6 192 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
COL12A1-206ENST00000474564 TRAV9-1A0A075B6T8 112 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 KLLNB2CW77 178 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 M0R2Z0 102 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 IGHV4-30-4P0DP06 118 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 FAM3BP58499 235 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-206ENST00000474564 FXYD7P58549 80 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 RAB5BP61020 215 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 LINC01587Q99440 93 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 XCL2Q9UBD3 114 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 V9GYV3 84 aa7.63□□□□□ -1.19
COL12A1-206ENST00000474564 A8MZ25 164 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 SH2D1AO60880 128 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 RAB4BP61018 213 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
COL12A1-206ENST00000474564 Q6AWC8 147 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 AMTNQ6UX39 209 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 ZFAND2AQ8N6M9 145 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 TPPP3Q9BW30 176 aa7.62□□□□□ -1.19
COL12A1-206ENST00000474564 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms