RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 C9orf47Q6ZRZ4 202 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 EIF4E3Q8N5X7 224 aaKnown RBP6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 ZNF680Q8NEM1 530 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 S100ZQ8WXG8 99 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 C18orf15Q96N68 181 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 VGLL1Q99990 258 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 UPK3BQ9BT76 320 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 AAMDCQ9H7C9 122 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 TP53TG3Q9ULZ0 132 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
TNFRSF9-202ENST00000474475 TRGV2A0A075B6R0 118 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 A0A096LPF7 62 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 TRGV1A0A0A0MS02 117 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 E5RGE8 158 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 SPINK4O60575 86 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 GPX1P07203 203 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 OR10J4P0C629 311 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 NBEAP1P0C6P0 100 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 IFITM3Q01628 133 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 ANXA2RQ3ZCQ2 193 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 LRRC37A5PQ49AS3 106 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 CT83Q5H943 113 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 ENKURQ8TC29 256 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 FXYD5Q96DB9 178 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 NMES1Q9C002 83 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 WDR61Q9GZS3 305 aaKnown RBP6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 SLC25A31Q9H0C2 315 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 OR51M1Q9H341 326 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 Q9H3A6 140 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 FUT9Q9Y231 359 aa6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 MRPS16Q9Y3D3 137 aaKnown RBP6.05□□□□□ -1.44
TNFRSF9-202ENST00000474475 UPK1BO75841 260 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 NMBP08949 121 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 TCL1AP56279 114 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 H2BFSP57053 126 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 TTC32Q5I0X7 151 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 TMEM78Q5T7P6 136 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 Q8TAT8 98 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 PHYHIPLQ96FC7 376 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 PAXXQ9BUH6 204 aa6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 MRPL32Q9BYC8 188 aaKnown RBP6.04□□□□□ -1.44
TNFRSF9-202ENST00000474475 ABCA13Q86UQ4 5058 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 IGHV1OR15-1A0A075B7D0 117 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 A0A1W2PPQ1 181 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 INMT-MINDY4F8WBC2 141 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 CDK2AP2O75956 126 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 ZNF138P52744 262 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 IBA57Q5T440 356 aaKnown RBP6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 SPATA12Q7Z6I5 190 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 ST6GAL2Q96JF0 529 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 MRPL16Q9NX20 251 aaKnown RBP6.03□□□□□ -1.44
TNFRSF9-202ENST00000474475 TRBV7-9A0A0J9YWB2 115 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 C17orf112F2Z3M2 114 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 OR7C2O60412 319 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 PRAF2O60831 178 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 KRTAP10-2P60368 255 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 RANP62826 216 aaKnown RBP6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 CYCSP99999 105 aaKnown RBP6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 PPP1R1CQ8WVI7 109 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 ATP5SQ99766 215 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 MARVELD1Q9BSK0 173 aa6.02□□□□□ -1.45
TNFRSF9-202ENST00000474475 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 EIF3GO75821 320 aaKnown RBP eCLIP6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 MPC2O95563 127 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 BTF3P20290 206 aaKnown RBP6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 CRYBA4P53673 196 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 LINC00315P59091 139 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 UBE2L3P68036 154 aaKnown RBP6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 FHL2Q14192 279 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 ZNF266Q14584 549 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 FFAR4Q5NUL3 377 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 MUC21Q5SSG8 566 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 Q6ZRN7 208 aaPredicted RBP6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 ARPC5LQ9BPX5 153 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 MDFICQ9P1T7 246 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 HSPB11Q9Y547 144 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 ICOSQ9Y6W8 199 aa6.01□□□□□ -1.45
TNFRSF9-202ENST00000474475 DIRC3C9JPN6 131 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 SIVA1O15304 175 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 NXPH4O95158 308 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 CSN1S1P47710 185 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 ZNF415Q09FC8 603 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 TOR2AQ5JU69 321 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 LYPD1Q8N2G4 141 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 MAPKAPK5-AS1Q8N8E1 139 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 C8orf49Q96NF6 230 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 PRO0255Q9UI72 69 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 HHLA3Q9XRX5 114 aa6□□□□□ -1.45
TNFRSF9-202ENST00000474475 SSNA1O43805 119 aa5.99□□□□□ -1.45
TNFRSF9-202ENST00000474475 RPL12P30050 165 aaKnown RBP5.99□□□□□ -1.45
TNFRSF9-202ENST00000474475 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
TNFRSF9-202ENST00000474475 GAGE13Q4V321 117 aa5.99□□□□□ -1.45
TNFRSF9-202ENST00000474475 KHDC3LQ587J8 217 aa5.99□□□□□ -1.45
TNFRSF9-202ENST00000474475 Q6AWC8 147 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms