RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 H7C1C5 153 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 K7ERS5 55 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 M0R2Z0 102 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 SYNGR1O43759 233 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 CST7O76096 145 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 CNIH1O95406 144 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 SPINK8P0C7L1 97 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 COX8AP10176 69 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 BLVRBP30043 206 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-212ENST00000473961 CA7P43166 264 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 DLX6P56179 175 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 PSG4Q00888 419 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 KLRD1Q13241 179 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 Q56UQ5 140 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 PSMG4Q5JS54 123 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM215Q68D42 235 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM42Q69YG0 159 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM136Q6ZRR5 245 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 Q6ZS92 163 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 SPATA12Q7Z6I5 190 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 DAZ4Q86SG3 579 aaKnown RBP2.52□□□□□ -2.01
BRCA1-212ENST00000473961 ATOH7Q8N100 152 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 LRRC25Q8N386 305 aaPredicted RBP2.52□□□□□ -2.01
BRCA1-212ENST00000473961 RPP25LQ8N5L8 163 aaKnown RBP2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM251Q8N6I4 163 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 OR4X2Q8NGF9 303 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 OR10D3Q8NH80 312 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 PP6455Q8WZ26 134 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 CLDN23Q96B33 292 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 AMELYQ99218 206 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM222Q9H0R3 208 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 DAZ1Q9NQZ3 744 aaKnown RBP2.52□□□□□ -2.01
BRCA1-212ENST00000473961 MED29Q9NX70 200 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 RABAC1Q9UI14 185 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 PRO0461Q9UI25 63 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 ZNF835Q9Y2P0 537 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 ARL2-SNX15V9GYD0 113 aa2.52□□□□□ -2.01
BRCA1-212ENST00000473961 TNS1Q9HBL0 1735 aaKnown RBP2.51□□□□□ -2.01
BRCA1-212ENST00000473961 C9JCJ5 164 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 F2Z2F3 143 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 SYS1-DBNDD2H3BUS1 97 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 ISLRO14498 428 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 RER1O15258 196 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 APOA2P02652 100 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 ORM1P02763 201 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 ASAH2BP0C7U1 165 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 SMIM13P0DJ93 91 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 NPPCP23582 126 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 OR8B8Q15620 311 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 NMSQ5H8A3 153 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 SPATA31B1PQ5VZV4 182 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 EBLN2Q6P2I7 272 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 Q6ZS49 121 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 OSR2Q8N2R0 312 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 SMIM20Q8N5G0 67 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 ATP6V0E2Q8NHE4 81 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 LMX1AQ8TE12 382 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 PTH2Q96A98 100 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 APOBEC3DQ96AK3 386 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-212ENST00000473961 CHCHD1Q96BP2 118 aaKnown RBP2.51□□□□□ -2.01
BRCA1-212ENST00000473961 ADAT3Q96EY9 351 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM126AQ9H061 195 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM133Q9H2Q1 129 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 TXNIPQ9H3M7 391 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 VSIRQ9H7M9 311 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 OSTCQ9NRP0 149 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.51□□□□□ -2.01
BRCA1-212ENST00000473961 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
BRCA1-212ENST00000473961 DYSFO75923 2080 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 IGHV3OR16-8A0A075B7F1 116 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 A0A087WX48 190 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 TRGV10A0A0A0MS01 117 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 TMEM262E9PQX1 116 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 H0Y980 276 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 K7EQS6 105 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 SLC31A1O15431 190 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 SYNGR2O43760 224 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 KLF7O75840 302 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 OR7C1O76099 320 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 CPMP14384 443 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 SRIP30626 198 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 GNG3P63215 75 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 RPL18Q07020 188 aaKnown RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 C2orf91Q6ZV80 131 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 MARCH3Q86UD3 253 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 OR5AS1Q8N127 324 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 C2orf73Q8N5S3 287 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-212ENST00000473961 TEX29Q8N6K0 151 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 GATD1Q8NB37 220 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 OR8B12Q8NGG6 310 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 CT55Q8WUE5 264 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 LINC01587Q99440 93 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 PBOV1Q9GZY1 135 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 FAM60AQ9NP50 221 aa2.5□□□□□ -2.01
BRCA1-212ENST00000473961 PSENENQ9NZ42 101 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms