RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CEBPGP53567 150 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 TAS2R60P59551 318 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 UBE2G1P62253 170 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 SOHLH1Q5JUK2 328 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 EBLN2Q6P2I7 272 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 LINC00336Q6ZUF6 198 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 OR8A1Q8NGG7 326 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 LINC00477Q96M19 166 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 PARLQ9H300 379 aa6.56□□□□□ -1.36
SF3A1-206ENST00000471037 SAV1Q9H4B6 383 aaPredicted RBP6.56□□□□□ -1.36
SF3A1-206ENST00000471037 A0A0J9YX75 114 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 C9JCJ5 164 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 PRAC2D3DTV9 90 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 NPIPB6E9PJ23 425 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 HLA-DRB4P13762 266 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 FLI1Q01543 452 aaPredicted RBP6.55□□□□□ -1.36
SF3A1-206ENST00000471037 HIST1H1AQ02539 215 aaPredicted RBP6.55□□□□□ -1.36
SF3A1-206ENST00000471037 ZNF674Q2M3X9 581 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 TMEM78Q5T7P6 136 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 Q86TA4 180 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 SMIM12Q96EX1 92 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 SMIM7Q9BQ49 75 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 SEC11CQ9BY50 192 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 PPP1R14DQ9NXH3 145 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 PSG8Q9UQ74 426 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 HLA-DRB4X5D2U9 266 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 DNAH2Q9P225 4427 aa6.55□□□□□ -1.36
SF3A1-206ENST00000471037 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 TRAV34A0A0B4J273 112 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 IGHV4-28A0A0C4DH34 117 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 TRBV7-9A0A0J9YWB2 115 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 KRBOX1C9JBD0 128 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 F6UB75 175 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 IGLV2-11P01706 119 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
SF3A1-206ENST00000471037 MIFP14174 115 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 ZNF138P52744 262 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 CENPWQ5EE01 88 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 ACTL10Q5JWF8 245 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 TRPT1Q86TN4 253 aaKnown RBP6.54□□□□□ -1.36
SF3A1-206ENST00000471037 LINC00479Q96M42 142 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 ODF3Q96PU9 254 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 VGLL1Q99990 258 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 NIPSNAP3BQ9BS92 247 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 DERL1Q9BUN8 251 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 AGPAT4-IT1Q9H0P7 198 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 ZFP30Q9Y2G7 519 aa6.54□□□□□ -1.36
SF3A1-206ENST00000471037 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 A8MTW9 85 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 F8W036 122 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 H3BMM0 161 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 LTAP01374 205 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 RBMY1A1P0DJD3 496 aaKnown RBP6.53□□□□□ -1.36
SF3A1-206ENST00000471037 RBMY1CP0DJD4 496 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 GNG4P50150 75 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 DEFB1P60022 68 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 ERCC8Q13216 396 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 RBMY1FQ15415 496 aaKnown RBP6.53□□□□□ -1.36
SF3A1-206ENST00000471037 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 SAPCD1Q5SSQ6 148 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 C10orf91Q5T1B1 145 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 GDF5OSQ5U4N7 250 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 MORN3Q6PF18 240 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-206ENST00000471037 Q6ZTC4 211 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 BAGE2Q86Y30 109 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 STHQ8IWL8 128 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 IGF2BP2-AS1Q96M15 143 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 LY96Q9Y6Y9 160 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 X6R8D5 127 aa6.53□□□□□ -1.36
SF3A1-206ENST00000471037 PKHD1P08F94 4074 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 AMBPP02760 352 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 ZNF705DP0CH99 300 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-206ENST00000471037 ZNF705BP0CI00 300 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-206ENST00000471037 CT45A10P0DMU9 189 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 PRB4P10163 310 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-206ENST00000471037 CRISP2P16562 243 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 ADCYAP1P18509 176 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 TSPOP30536 169 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 PNRC1Q12796 327 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-206ENST00000471037 TMEM241Q24JQ0 296 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 COX8CQ7Z4L0 72 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 TMEM183AQ8IXX5 376 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 OR4B1Q8NGF8 309 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 Q8TAT8 98 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 SGK494Q96LW2 274 aa6.52□□□□□ -1.37
SF3A1-206ENST00000471037 BIN3Q9NQY0 253 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms