RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 FAM210BQ96KR6 192 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 LINC00477Q96M19 166 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 NEU1Q99519 415 aa6.18□□□□□ -1.42
GTF3A-206ENST00000470606 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
GTF3A-206ENST00000470606 FBLL1A6NHQ2 334 aaKnown RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 J3KRW8 73 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 P01737 135 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 ID1P41134 155 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 DEFB131AP59861 70 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 SNRPD3P62318 126 aaKnown RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 PRR31Q5SQ13 230 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 AMTNQ6UX39 209 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 TSKUQ8WUA8 353 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 SAV1Q9H4B6 383 aaPredicted RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 MAP6D1Q9H9H5 199 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 MUC4Q99102 2169 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 RBMY1BA6NDE4 496 aaKnown RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 RBMY1EA6NEQ0 496 aaKnown RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 HIGD1CA8MV81 97 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 IGKV3-20P01619 116 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 RBMY1DP0C7P1 496 aaKnown RBP6.17□□□□□ -1.42
GTF3A-206ENST00000470606 SMUG1Q53HV7 270 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 OR2D3Q8NGH3 330 aa6.17□□□□□ -1.42
GTF3A-206ENST00000470606 TMSB15BA0A087X1C1 80 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 TRAV2A0A0B4J234 112 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 KLLNB2CW77 178 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 TYMSP04818 313 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 CRISP2P16562 243 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 RPS10P46783 165 aaKnown RBP6.16□□□□□ -1.42
GTF3A-206ENST00000470606 PAFAH1B2P68402 229 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 CT83Q5H943 113 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 SAMD13Q5VXD3 122 aa6.16□□□□□ -1.42
GTF3A-206ENST00000470606 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
GTF3A-206ENST00000470606 TRAV25A0A0B4J276 109 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 A8MTW9 85 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 FABP5P3A8MUU1 101 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 M0R2Z0 102 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 PF4P02776 101 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 TRGC2P03986 189 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 CD7P09564 240 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 S100PP25815 95 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 ACTL10Q5JWF8 245 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 FOXI2Q6ZQN5 318 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 ZFP82Q8N141 532 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 DAZAP1Q96EP5 407 aaKnown RBP6.15□□□□□ -1.42
GTF3A-206ENST00000470606 WFDC10AQ9H1F0 79 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
GTF3A-206ENST00000470606 MGAM2Q2M2H8 2515 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 TRAV12-2A0A075B6T6 113 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 H3BMM0 161 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.43
GTF3A-206ENST00000470606 MRPL54Q6P161 138 aaKnown RBP6.15□□□□□ -1.43
GTF3A-206ENST00000470606 KCNIP4Q6PIL6 250 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 OR4B1Q8NGF8 309 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 PGLYRP4Q96LB8 373 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 NDFIP1Q9BT67 221 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 BIN3Q9NQY0 253 aa6.15□□□□□ -1.43
GTF3A-206ENST00000470606 MUC21A0A0G2JKD1 596 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 MUC21A0A140T8X8 626 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 A0A1B0GXF2 115 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 GRIFINA4D1Z8 144 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 A8MWL6 223 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
GTF3A-206ENST00000470606 RBMY1A1P0DJD3 496 aaKnown RBP6.14□□□□□ -1.43
GTF3A-206ENST00000470606 RBMY1CP0DJD4 496 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 HLA-DRB4P13762 266 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 RNASE4P34096 147 aaKnown RBP6.14□□□□□ -1.43
GTF3A-206ENST00000470606 RBMY1FQ15415 496 aaKnown RBP6.14□□□□□ -1.43
GTF3A-206ENST00000470606 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 BEAN1Q3B7T3 259 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 MUC21Q5SSG8 566 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 Q6AWC8 147 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 FRZBQ92765 325 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 BTF3L4Q96K17 158 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 SRD5A3Q9H8P0 318 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 HLA-DRB4X5D2U9 266 aa6.14□□□□□ -1.43
GTF3A-206ENST00000470606 TRBV7-9A0A0J9YWB2 115 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 TMEM189A5PLL7 270 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 OR4C46A6NHA9 309 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 CRXO43186 299 aaPredicted RBP6.13□□□□□ -1.43
GTF3A-206ENST00000470606 ORM1P02763 201 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 GPX1P07203 203 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 ARMS2P0C7Q2 107 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 FXYD7P58549 80 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 GFI1BQ5VTD9 330 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 EBLN2Q6P2I7 272 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 ZNF747Q9BV97 191 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 GFRA4Q9GZZ7 299 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 NAT8BQ9UHF3 227 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
GTF3A-206ENST00000470606 FAM231BA6NCW3 169 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms