RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 FLI1Q01543 452 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-203ENST00000470278 ZNF680Q8NEM1 530 aa10.78□□□□□ -0.68
CDC42SE1-203ENST00000470278 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
CDC42SE1-203ENST00000470278 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
CDC42SE1-203ENST00000470278 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
CDC42SE1-203ENST00000470278 IGHV3OR16-12A0A075B7B8 117 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 IGHV4-28A0A0C4DH34 117 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 ZNF324O75467 553 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 GPX1P07203 203 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 TAS2R60P59551 318 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 BTN1A1Q13410 526 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 PRR9Q5T870 116 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 C11orf52Q96A22 123 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 TVP23CQ96ET8 276 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 NIPSNAP3BQ9BS92 247 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 PSG8Q9UQ74 426 aa10.77□□□□□ -0.69
CDC42SE1-203ENST00000470278 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 A0A0J9YWU9 116 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 MEF2BQ02080 365 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 SAPCD1Q5SSQ6 148 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 Q6AWC8 147 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 Q86TA4 180 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 PYGO2Q9BRQ0 406 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 TREM1Q9NP99 234 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 VAX2Q9UIW0 290 aa10.76□□□□□ -0.69
CDC42SE1-203ENST00000470278 LCE6AA0A183 80 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 SCO2A0A1W2PP80 73 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 TMEM189A5PLL7 270 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 J3KRW8 73 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 SGK494Q96LW2 274 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 LINC01587Q99440 93 aa10.75□□□□□ -0.69
CDC42SE1-203ENST00000470278 LOC102723971A0A1B0GUV8 181 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 PDE6DO43924 150 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 S100A9P06702 114 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 RNASE4P34096 147 aaKnown RBP10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 AKR1C3P42330 323 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 ZFP30Q9Y2G7 519 aa10.74□□□□□ -0.69
CDC42SE1-203ENST00000470278 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 LTAP01374 205 aa10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 UBE2G1P62253 170 aa10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 ZNF493Q6ZR52 646 aa10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 RNASE8Q8TDE3 154 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
CDC42SE1-203ENST00000470278 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
CDC42SE1-203ENST00000470278 TEX48A0A1B0GUV7 120 aa10.72□□□□□ -0.69
CDC42SE1-203ENST00000470278 ZNF705GA8MUZ8 300 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE1-203ENST00000470278 NDUFS6O75380 124 aaKnown RBP10.72□□□□□ -0.69
CDC42SE1-203ENST00000470278 SMUG1Q53HV7 270 aa10.72□□□□□ -0.69
CDC42SE1-203ENST00000470278 PLAC8L1A1L4L8 177 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 DEFB4AO15263 64 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 IL17DQ8TAD2 202 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
CDC42SE1-203ENST00000470278 IGHV1OR15-1A0A075B7D0 117 aa10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 RGS13O14921 159 aa10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 GCGP01275 180 aa10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 PFN1P07737 140 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 AZU1P20160 251 aa10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 RPL35P42766 123 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 Q6ZQT7 251 aa10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 EIF4E3Q8N5X7 224 aaKnown RBP10.7□□□□□ -0.7
CDC42SE1-203ENST00000470278 TMEM250H0YL14 139 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 PRM2P04554 102 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 IBA57Q5T440 356 aaKnown RBP10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZFAND6Q6FIF0 208 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZNF767PQ75MW2 155 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 TMEM183AQ8IXX5 376 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 SMIM12Q96EX1 92 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 DKK2Q9UBU2 259 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
CDC42SE1-203ENST00000470278 CBY3A6NI87 242 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 SPART-AS1P0CW21 52 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 HTN1P15515 57 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 TOR2AQ5JU69 321 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 FAM159AQ6UWV7 190 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 C11orf72Q8NBR9 251 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 DERL1Q9BUN8 251 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 CELA1Q9UNI1 258 aa10.68□□□□□ -0.7
CDC42SE1-203ENST00000470278 EMP1P54849 157 aa10.67□□□□□ -0.7
CDC42SE1-203ENST00000470278 FAM222AQ5U5X8 452 aa10.67□□□□□ -0.7
CDC42SE1-203ENST00000470278 PCNPQ8WW12 178 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms