RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 TCL1AP56279 114 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 TAS2R60P59551 318 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 RAB4BP61018 213 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 C10orf113Q5VZT2 155 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 PVRIGQ6DKI7 326 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 CLEC19AQ6UXS0 136 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 POM121L12Q8N7R1 296 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 EEF1AKMT3Q96AZ1 226 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 IGF2BP2-AS1Q96M15 143 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
SYNGAP1-205ENST00000470232 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 A0A1B0GV90 55 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 M0R2N4 97 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 NUPR1O60356 82 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 SERF1AO75920 110 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 FCGR2BP31994 310 aaPredicted RBP6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 USF2Q15853 346 aaPredicted RBP6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 C10orf55Q5SWW7 151 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 ETFRF1Q6IPR1 90 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 THAP8Q8NA92 274 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 NPIPB3Q92617 1050 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 FAM167A-AS1Q96KT0 104 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 RNASE7Q9H1E1 156 aaKnown RBP6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGHV4-4A0A075B6R2 117 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 TRBV7-1A0A0A6YYK4 115 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 CGB1A6NKQ9 187 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 PEX7O00628 323 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 ISLRO14498 428 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 SPINK4O60575 86 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 REG1AP05451 166 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 SNRPCP09234 159 aaKnown RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 PYYP10082 97 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 ESDP10768 282 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 RPL27AP46776 148 aaKnown RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 SSTP61278 116 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 Q0VG73 95 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 C1orf194Q5T5A4 169 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 TOMM20LQ6UXN7 152 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 ZNF600Q6ZNG1 722 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 GRAMD2BQ96HH9 432 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 CHRDL1Q9BU40 450 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 FNDC4Q9H6D8 234 aaPredicted RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 TP53TG3Q9ULZ0 132 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 LRP1BQ9NZR2 4599 aa6.51□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 E7EUB6 86 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGLV2-8P01709 118 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGHV3-23P01764 117 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 SLC25A5P05141 298 aaKnown RBP6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 CLEC3BP05452 202 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 LBHQ53QV2 105 aaPredicted RBP6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 MORN5Q5VZ52 161 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 ZNF586Q9NXT0 402 aa6.5□□□□□ -1.37
SYNGAP1-205ENST00000470232 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 F2Z2F3 143 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 EREGO14944 169 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 DEFB4AO15263 64 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 IGHV3-48P01763 117 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 APCSP02743 223 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 LINC00310P59036 64 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 UBE2G1P62253 170 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 MRGPRG-AS1Q2M3A8 158 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 ODF3L2Q3SX64 289 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 KIAA1644Q3SXP7 199 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 OR10J3Q5JRS4 329 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 Q8N1X5 172 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 NHLRC2Q8NBF2 726 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 OR1B1Q8NGR6 318 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 FXYD5Q96DB9 178 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 KCNS1Q96KK3 526 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 TRGV9Q99603 122 aa6.49□□□□□ -1.37
SYNGAP1-205ENST00000470232 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 TRAV34A0A0B4J273 112 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 M0R143 59 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 ORM2P19652 201 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 PMCHP20382 165 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 HLA-DMBP28068 263 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 GNG5P63218 68 aa6.48□□□□□ -1.37
SYNGAP1-205ENST00000470232 TMEM183BQ1AE95 376 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms