RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 COL25A1Q9BXS0 654 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-209ENST00000470026 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 WNK2Q9Y3S1 2297 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 NRACQ8N912 160 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 LENEPQ9Y5L5 61 aa10.45□□□□□ -0.74
BRCA1-209ENST00000470026 SPTA1P02549 2419 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 A6NDN8 102 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 GATA1P15976 413 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-209ENST00000470026 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 OR2K2Q8NGT1 345 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 GLMPQ8WWB7 406 aa10.44□□□□□ -0.74
BRCA1-209ENST00000470026 ITLN2Q8WWU7 325 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-209ENST00000470026 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 TRGV3P03979 118 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 EVI2AP22794 236 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 UFSP1Q6NVU6 142 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 UBTD1Q9HAC8 227 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 SMPXQ9UHP9 88 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 ATP5LO75964 103 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 WFDC3Q8IUB2 231 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 C18orf15Q96N68 181 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 MOB4Q9Y3A3 225 aa10.43□□□□□ -0.74
BRCA1-209ENST00000470026 RELNP78509 3460 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 IGHV3OR16-13A0A075B7E8 117 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 IGHV3-74A0A0B4J1X5 117 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 HLA-DRB4P13762 266 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 C9orf139Q6ZV77 190 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 TMEM158Q8WZ71 300 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 TRAV41A0A0B4J266 112 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 BRI3O95415 125 aa10.42□□□□□ -0.74
BRCA1-209ENST00000470026 CSMD1Q96PZ7 3565 aa10.41□□□□□ -0.74
BRCA1-209ENST00000470026 IGKV2D-26A0A0A0MRZ7 120 aa10.41□□□□□ -0.74
BRCA1-209ENST00000470026 IGHV3-49A0A0A0MS15 119 aa10.41□□□□□ -0.74
BRCA1-209ENST00000470026 ZNF207O43670 478 aaKnown RBP10.41□□□□□ -0.74
BRCA1-209ENST00000470026 NMUP48645 174 aa10.41□□□□□ -0.74
BRCA1-209ENST00000470026 IGKCP01834 107 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 OCIAD2Q56VL3 154 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 PRR9Q5T870 116 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 GPHB5Q86YW7 130 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 SOCS3O14543 225 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 UQCRFS1P47985 274 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 PCP4P48539 62 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 Q6ZQT7 251 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 MRAP2Q96G30 205 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
BRCA1-209ENST00000470026 DPM2O94777 84 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 PRSS1P07477 247 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 LAGE3Q14657 143 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 MEGF9Q9H1U4 602 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 MED13LQ71F56 2210 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 IGF1P05019 195 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 TCTAP57738 103 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 FOXC2Q99958 501 aa10.39□□□□□ -0.75
BRCA1-209ENST00000470026 IGHV1-69DA0A0B4J2H0 117 aa10.38□□□□□ -0.75
BRCA1-209ENST00000470026 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
BRCA1-209ENST00000470026 NDUFA4O00483 81 aa10.38□□□□□ -0.75
BRCA1-209ENST00000470026 IGHV1-69P01742 117 aa10.38□□□□□ -0.75
BRCA1-209ENST00000470026 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
BRCA1-209ENST00000470026 H3BUA1 57 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 K7EP34 96 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 ARL3P36405 182 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 FAM19A4Q96LR4 140 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 NBASA2RRP1 2371 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 A0A0G2JLM5 398 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 OVOL1O14753 267 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 SRSF1Q07955 248 aaKnown RBP eCLIP10.37□□□□□ -0.75
BRCA1-209ENST00000470026 UNQ9165/PRO28630Q6UXU0 137 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 APRG1Q8IVJ8 170 aa10.37□□□□□ -0.75
BRCA1-209ENST00000470026 A0A087WX48 190 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 TMEM8BA6NDV4 472 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 H3BUT2 72 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 H3BVH4 76 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 IGHV4-39P01824 125 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 UFC1Q9Y3C8 167 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 HIVEP3Q5T1R4 2406 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 C19orf84I3L1E1 186 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 ZC2HC1BQ5TFG8 222 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 SMIM2Q9BVW6 85 aa10.36□□□□□ -0.75
BRCA1-209ENST00000470026 MRPL35Q9NZE8 188 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms