RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RCHY1Q96PM5 261 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 GFRA4Q9GZZ7 299 aa13.2□□□□□ -0.3
MRPL28-208ENST00000469744 RPP21Q9H633 154 aaKnown RBP13.2□□□□□ -0.3
MRPL28-208ENST00000469744 A8MWL6 223 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 NPIPB6E9PJ23 425 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 PSG3Q16557 428 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 TMEM136Q6ZRR5 245 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 ATP5L2Q7Z4Y8 100 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 GTSCR1Q86UQ5 136 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 DAZAP1Q96EP5 407 aaKnown RBP13.19□□□□□ -0.3
MRPL28-208ENST00000469744 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 PSG8Q9UQ74 426 aa13.19□□□□□ -0.3
MRPL28-208ENST00000469744 PRR27Q6MZM9 219 aa13.18□□□□□ -0.3
MRPL28-208ENST00000469744 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
MRPL28-208ENST00000469744 GPHB5Q86YW7 130 aa13.18□□□□□ -0.3
MRPL28-208ENST00000469744 OR10D4PQ8NGN7 298 aa13.18□□□□□ -0.3
MRPL28-208ENST00000469744 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
MRPL28-208ENST00000469744 TMEM213A2RRL7 107 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 LGALS9O00182 355 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 BUB3O43684 328 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 P01737 135 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 Q0VG73 95 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 DEFB114Q30KQ6 69 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 UNQ9165/PRO28630Q6UXU0 137 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 PRNTQ86SH4 94 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 U3KQE9 123 aa13.17□□□□□ -0.3
MRPL28-208ENST00000469744 KMT2CQ8NEZ4 4911 aaKnown RBP13.17□□□□□ -0.3
MRPL28-208ENST00000469744 FABP4P15090 132 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 TCL1AP56279 114 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 TM4SF20Q53R12 229 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 TMEM18Q96B42 140 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 SGK494Q96LW2 274 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 AMBPP02760 352 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 CD7P09564 240 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 ESDP10768 282 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
MRPL28-208ENST00000469744 METTL26Q96S19 204 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 WFDC10AQ9H1F0 79 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
MRPL28-208ENST00000469744 TRAV8-1A0A0A6YYK1 113 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 A8MWP6 167 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 A8MZ25 164 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
MRPL28-208ENST00000469744 CRISP2P16562 243 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 PDZD11Q5EBL8 140 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
MRPL28-208ENST00000469744 NEU1Q99519 415 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
MRPL28-208ENST00000469744 FOXA3P55318 350 aaPredicted RBP13.14□□□□□ -0.31
MRPL28-208ENST00000469744 PYY3Q5JQD4 70 aa13.14□□□□□ -0.31
MRPL28-208ENST00000469744 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
MRPL28-208ENST00000469744 TMEM61Q8N0U2 210 aa13.14□□□□□ -0.31
MRPL28-208ENST00000469744 A0A1B0GXF2 115 aa13.13□□□□□ -0.31
MRPL28-208ENST00000469744 HIGD1CA8MV81 97 aa13.13□□□□□ -0.31
MRPL28-208ENST00000469744 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
MRPL28-208ENST00000469744 MRPL54Q6P161 138 aaKnown RBP13.13□□□□□ -0.31
MRPL28-208ENST00000469744 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
MRPL28-208ENST00000469744 MRPL53Q96EL3 112 aaKnown RBP13.13□□□□□ -0.31
MRPL28-208ENST00000469744 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
MRPL28-208ENST00000469744 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
MRPL28-208ENST00000469744 M0R3E3 92 aa13.12□□□□□ -0.31
MRPL28-208ENST00000469744 NDUFA4O00483 81 aa13.12□□□□□ -0.31
MRPL28-208ENST00000469744 RBPMS2Q6ZRY4 209 aaKnown RBP13.12□□□□□ -0.31
MRPL28-208ENST00000469744 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
MRPL28-208ENST00000469744 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
MRPL28-208ENST00000469744 SPINK4O60575 86 aa13.11□□□□□ -0.31
MRPL28-208ENST00000469744 APCSP02743 223 aa13.11□□□□□ -0.31
MRPL28-208ENST00000469744 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
MRPL28-208ENST00000469744 JOSD1Q15040 202 aaPredicted RBP13.11□□□□□ -0.31
MRPL28-208ENST00000469744 CHEK1O14757 476 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 RAB4BP61018 213 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 RETNQ9HD89 108 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 UFC1Q9Y3C8 167 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 ZNF207O43670 478 aaKnown RBP13.1□□□□□ -0.31
MRPL28-208ENST00000469744 HBBP68871 147 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 Q6AWC8 147 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 OR2D3Q8NGH3 330 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 GTSF1Q8WW33 167 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
MRPL28-208ENST00000469744 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-208ENST00000469744 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-208ENST00000469744 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
MRPL28-208ENST00000469744 TCF24Q7RTU0 167 aa13.09□□□□□ -0.31
MRPL28-208ENST00000469744 TMEM256Q8N2U0 113 aa13.09□□□□□ -0.31
MRPL28-208ENST00000469744 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
MRPL28-208ENST00000469744 A0A1B0GW15 77 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms