RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 C2CD4CQ8TF44 421 aa6.56□□□□□ -1.36
FN1-216ENST00000469569 TMEM263Q8WUH6 116 aaKnown RBP6.56□□□□□ -1.36
FN1-216ENST00000469569 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
FN1-216ENST00000469569 LINC00467Q9BRT7 94 aa6.56□□□□□ -1.36
FN1-216ENST00000469569 NDFIP1Q9BT67 221 aa6.56□□□□□ -1.36
FN1-216ENST00000469569 TIMM8BQ9Y5J9 83 aaPredicted RBP6.56□□□□□ -1.36
FN1-216ENST00000469569 IGKV2-40A0A087WW87 121 aaPredicted RBP6.55□□□□□ -1.36
FN1-216ENST00000469569 DEFB4AO15263 64 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 IGKV2D-40P01614 121 aaPredicted RBP6.55□□□□□ -1.36
FN1-216ENST00000469569 FHITP49789 147 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 NANOS2P60321 138 aaKnown RBP6.55□□□□□ -1.36
FN1-216ENST00000469569 PMS2P11Q13670 270 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 GFI1BQ5VTD9 330 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 SLC51BQ86UW2 128 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 IQCF2Q8IXL9 164 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 ZNF680Q8NEM1 530 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 FAM19A4Q96LR4 140 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
FN1-216ENST00000469569 TRAV12-3A0A0B4J271 114 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
FN1-216ENST00000469569 SNURFLB1AK76 121 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 HMGB3O15347 200 aaKnown RBP6.54□□□□□ -1.36
FN1-216ENST00000469569 RNASE4P34096 147 aaKnown RBP6.54□□□□□ -1.36
FN1-216ENST00000469569 EMP1P54849 157 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 DAD1P61803 113 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 ERCC8Q13216 396 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 ANXA2RQ3ZCQ2 193 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
FN1-216ENST00000469569 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 VGLL1Q99990 258 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 ATG101Q9BSB4 218 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
FN1-216ENST00000469569 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
FN1-216ENST00000469569 ZNF324O75467 553 aaPredicted RBP6.53□□□□□ -1.36
FN1-216ENST00000469569 IFNA7P01567 189 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 TCRAP04437 139 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 HTN1P15515 57 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 C12orf74Q32Q52 190 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 ZFP69Q49AA0 526 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 SAPCD1Q5SSQ6 148 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 FAM222AQ5U5X8 452 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 ZFAND2AQ8N6M9 145 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 CYB561D1Q8N8Q1 229 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
FN1-216ENST00000469569 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 LCE6AA0A183 80 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 CBY3A6NI87 242 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
FN1-216ENST00000469569 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
FN1-216ENST00000469569 ZNF726P1Q15940 193 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 IBA57Q5T440 356 aaKnown RBP6.52□□□□□ -1.37
FN1-216ENST00000469569 Q6AWC8 147 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 Q6ZTC4 211 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 TMEM75Q8N9X5 138 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 FAM213BQ8TBF2 198 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
FN1-216ENST00000469569 SFT2D1Q8WV19 159 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 TREM1Q9NP99 234 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 RPH3ALQ9UNE2 315 aa6.52□□□□□ -1.37
FN1-216ENST00000469569 hCG_2014768A0A024R1R8 64 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 IGHV1OR15-1A0A075B7D0 117 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 TRAV1-1A0A0B4J248 108 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 TRAV21A0A0B4J279 112 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 FAM74A7A6NL05 159 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 J3KRW8 73 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 ATP5G1P05496 136 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
FN1-216ENST00000469569 ATP5G3P48201 142 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 FAM159AQ6UWV7 190 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 KCNS1Q96KK3 526 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 NDUFAF3Q9BU61 184 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
FN1-216ENST00000469569 TRGV11A0A075B6L2 103 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 GGTLC3B5MD39 225 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 IGLL5B9A064 214 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 PEX7O00628 323 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 EIF3GO75821 320 aaKnown RBP eCLIP6.5□□□□□ -1.37
FN1-216ENST00000469569 AZU1P20160 251 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 SULT1A2P50226 295 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 FLI1Q01543 452 aaPredicted RBP6.5□□□□□ -1.37
FN1-216ENST00000469569 CD300CQ08708 224 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 BTN1A1Q13410 526 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 TDRG1Q3Y452 100 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 CST9LP1Q5W188 147 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 SSX7Q7RTT5 188 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 NUDT10Q8NFP7 164 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 FMC1Q96HJ9 113 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 SPXQ9BT56 116 aa6.5□□□□□ -1.37
FN1-216ENST00000469569 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms