RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ZNF674Q2M3X9 581 aa6.01□□□□□ -1.45
NPHP3-204ENST00000469232 TMEM78Q5T7P6 136 aa6.01□□□□□ -1.45
NPHP3-204ENST00000469232 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
NPHP3-204ENST00000469232 ISOC2Q96AB3 205 aa6.01□□□□□ -1.45
NPHP3-204ENST00000469232 NBEAL1Q6ZS30 2694 aa6.01□□□□□ -1.45
NPHP3-204ENST00000469232 A8MZ25 164 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 B4DEV8 164 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 KRTAP10-11P60412 298 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 LCE3BQ5TA77 95 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 EBLN2Q6P2I7 272 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF575Q86XF7 245 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 BIN3Q9NQY0 253 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 OSTCQ9NRP0 149 aa6□□□□□ -1.45
NPHP3-204ENST00000469232 A0A087WWC5 75 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 PGPEP1LA6NFU8 196 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 KNCNA6PVL3 124 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF705DP0CH99 300 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF705BP0CI00 300 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 Q6AWC8 147 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 LINC00322Q6ZN03 302 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 PRNTQ86SH4 94 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 SVBPQ8N300 66 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 CLRN3Q8NCR9 226 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 Q8TAT8 98 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZC2HC1AQ96GY0 325 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 RPH3ALQ9UNE2 315 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 MGAM2Q2M2H8 2515 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 AGRNO00468 2067 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 CRXO43186 299 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 AMBPP02760 352 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 GIG44P09565 113 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 LEPP41159 167 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-204ENST00000469232 CEBPGP53567 150 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 RHEBQ15382 184 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF124Q15973 351 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 SMUG1Q53HV7 270 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 PRR9Q5T870 116 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 SGK494Q96LW2 274 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 C8orf49Q96NF6 230 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 NDFIP1Q9BT67 221 aa5.99□□□□□ -1.45
NPHP3-204ENST00000469232 ZNF324O75467 553 aaPredicted RBP5.98□□□□□ -1.45
NPHP3-204ENST00000469232 SNAPINO95295 136 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 APOC3P02656 99 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 CXCL1P09341 107 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 TSPOP30536 169 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 CT83Q5H943 113 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 ACTL10Q5JWF8 245 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 GTSCR1Q86UQ5 136 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 ASCL2Q99929 193 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 C20orf144Q9BQM9 153 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 LINC00467Q9BRT7 94 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 CTDSP1Q9GZU7 261 aa5.98□□□□□ -1.45
NPHP3-204ENST00000469232 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 G3V4G9 280 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 PFN1P07737 140 aaKnown RBP5.97□□□□□ -1.45
NPHP3-204ENST00000469232 PRB4P10163 310 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-204ENST00000469232 CDKN1BP46527 198 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 OR5I1Q13606 314 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 TDRG1Q3Y452 100 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 DNLZQ5SXM8 178 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 FAM162BQ5T6X4 162 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 MORN3Q6PF18 240 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-204ENST00000469232 ATRAIDQ6UW56 229 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 OR4B1Q8NGF8 309 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 NUDT11Q96G61 164 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 SFRP2Q96HF1 295 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 V9GYV3 84 aa5.97□□□□□ -1.45
NPHP3-204ENST00000469232 NOTCH1P46531 2555 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 KIR2DL5BA0A0G2JN68 375 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 KIR2DL5BA0A0G2JPC4 375 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 FABP5P3A8MUU1 101 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 PPP1R2P9O14990 202 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 SH2D1AO60880 128 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 FOXA3P55318 350 aaPredicted RBP5.96□□□□□ -1.45
NPHP3-204ENST00000469232 KIR3DS1Q14943 382 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 ADIRFQ15847 76 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 GFI1BQ5VTD9 330 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 STHQ8IWL8 128 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 KIR2DL5AQ8N109 375 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 DEFB125Q8N687 156 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 NHLRC2Q8NBF2 726 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 CSNK1G2-AS1Q8NCQ2 148 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 KIR2DL5BQ8NHK3 375 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 ANAPC16Q96DE5 110 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 WFDC10AQ9H1F0 79 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 AURKAIP1Q9NWT8 199 aaPredicted RBP5.96□□□□□ -1.45
NPHP3-204ENST00000469232 C11orf21Q9P2W6 132 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 TP53TG3Q9ULZ0 132 aa5.96□□□□□ -1.45
NPHP3-204ENST00000469232 TRAV21A0A0B4J279 112 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 C7orf71A4D174 169 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 FAM231BA6NCW3 169 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 RNF212Q495C1 297 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 IMMP2LQ96T52 175 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 TUBA4BQ9H853 241 aa5.96□□□□□ -1.46
NPHP3-204ENST00000469232 IGKV3D-20A0A0C4DH25 116 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms