RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 RXFP4Q8TDU9 374 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 RPUSD4Q96CM3 377 aaKnown RBP8.79□□□□□ -1
HDAC6-217ENST00000469223 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 Q9H3A6 140 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 TMEM14CQ9P0S9 112 aa8.79□□□□□ -1
HDAC6-217ENST00000469223 A0A1W2PRE2 83 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 ZNF705FA8MVS1 300 aaPredicted RBP8.78□□□□□ -1
HDAC6-217ENST00000469223 H3BRN7 92 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 K7EQG2 157 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 PAGE4O60829 102 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
HDAC6-217ENST00000469223 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
HDAC6-217ENST00000469223 DAD1P61803 113 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 FAM74A3Q4VXF1 159 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 C1orf194Q5T5A4 169 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 PATE2Q6UY27 113 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 ZNF705AQ6ZN79 300 aaPredicted RBP8.78□□□□□ -1
HDAC6-217ENST00000469223 NEU1Q99519 415 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 SLC25A2Q9BXI2 301 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
HDAC6-217ENST00000469223 SNAPINO95295 136 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 GALR1P47211 349 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 CEBPGP53567 150 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 SPATA31B1PQ5VZV4 182 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 OR8I2Q8N0Y5 310 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 Q9H8V8 135 aa8.77□□□□□ -1.01
HDAC6-217ENST00000469223 ZNF98A6NK75 572 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 EREGO14944 169 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 APOC3P02656 99 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 OR10J4P0C629 311 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 NBEAP1P0C6P0 100 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
HDAC6-217ENST00000469223 LINC00315P59091 139 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 UBE2G2P60604 165 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 PSG9Q00887 426 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 PDE6HQ13956 83 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 USF2Q15853 346 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-217ENST00000469223 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 AAMDCQ9H7C9 122 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
HDAC6-217ENST00000469223 CARHSP1Q9Y2V2 147 aaKnown RBP8.76□□□□□ -1.01
HDAC6-217ENST00000469223 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
HDAC6-217ENST00000469223 SMIM9A6NGZ8 99 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 FAM74A7A6NL05 159 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 SRP19P09132 144 aaKnown RBP8.75□□□□□ -1.01
HDAC6-217ENST00000469223 CRYBB3P26998 211 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 ERVFC1-1P60608 527 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 NUTF2P61970 127 aaKnown RBP8.75□□□□□ -1.01
HDAC6-217ENST00000469223 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-217ENST00000469223 PSMG4Q5JS54 123 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 SAMD13Q5VXD3 122 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-217ENST00000469223 CCDC28AQ8IWP9 274 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 CMTM2Q8TAZ6 248 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 LINC00052Q96N35 136 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
HDAC6-217ENST00000469223 TRAV5A0A0B4J249 113 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 HELTA6NFD8 242 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 K7EQM0 130 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 DNAH10OSP0CZ25 163 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 SRSF3P84103 164 aaKnown RBP8.74□□□□□ -1.01
HDAC6-217ENST00000469223 CYB561D1Q8N8Q1 229 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 HIST1H2BAQ96A08 127 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 FXYD5Q96DB9 178 aa8.74□□□□□ -1.01
HDAC6-217ENST00000469223 ZNF253O75346 499 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 EIF3GO75821 320 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC6-217ENST00000469223 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
HDAC6-217ENST00000469223 PYYP10082 97 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 CSN1S1P47710 185 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 SMIM7Q9BQ49 75 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
HDAC6-217ENST00000469223 SERTM2A0A1B0GWG4 89 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 A0A1W2PPQ1 181 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 B4DEV8 164 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 M0R036 132 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 BUB3O43684 328 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 CNN1P51911 297 aaKnown RBP8.72□□□□□ -1.01
HDAC6-217ENST00000469223 FXYD7P58549 80 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 RANP62826 216 aaKnown RBP8.72□□□□□ -1.01
HDAC6-217ENST00000469223 SUMO1P63165 101 aaKnown RBP8.72□□□□□ -1.01
HDAC6-217ENST00000469223 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 DCANP1Q8TF63 244 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 TVP23CQ96ET8 276 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 SLC50A1Q9BRV3 221 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 NAT8Q9UHE5 227 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 U3KQE9 123 aa8.72□□□□□ -1.01
HDAC6-217ENST00000469223 TRBV19A0A075B6N1 114 aa8.71□□□□□ -1.02
HDAC6-217ENST00000469223 FBLL1A6NHQ2 334 aaKnown RBP8.71□□□□□ -1.02
HDAC6-217ENST00000469223 F5H768 121 aa8.71□□□□□ -1.02
HDAC6-217ENST00000469223 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
HDAC6-217ENST00000469223 SLC25A5P05141 298 aaKnown RBP8.71□□□□□ -1.02
HDAC6-217ENST00000469223 AKR1C3P42330 323 aa8.71□□□□□ -1.02
HDAC6-217ENST00000469223 ATP5G3P48201 142 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms