RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 Q9H3A6 140 aa7.88□□□□□ -1.15
COL4A6-205ENST00000468338 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
COL4A6-205ENST00000468338 IGKV2-40A0A087WW87 121 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-205ENST00000468338 RBAKDNA6NC62 111 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
COL4A6-205ENST00000468338 IGKV2D-40P01614 121 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-205ENST00000468338 DAD1P61803 113 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 ARL6IP6Q8N6S5 226 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 HSD17B11Q8NBQ5 300 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-205ENST00000468338 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 SUN5Q8TC36 379 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 NDUFAF3Q9BU61 184 aa7.87□□□□□ -1.15
COL4A6-205ENST00000468338 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
COL4A6-205ENST00000468338 TRAV12-3A0A0B4J271 114 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 A0A1W2PPV4 95 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 C7orf71A4D174 169 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 STAG3L2P0CL84 134 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 STAG3L3P0CL85 134 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 CD300CQ08708 224 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 RXFP4Q8TDU9 374 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 OTORQ9NRC9 128 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 DNAH10Q8IVF4 4471 aa7.86□□□□□ -1.15
COL4A6-205ENST00000468338 FXYD6-FXYD2A0A087WZ82 144 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 CBY3A6NI87 242 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 MBP02144 154 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 HTN1P15515 57 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 CSN1S1P47710 185 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 ZNF138P52744 262 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
COL4A6-205ENST00000468338 ANXA2RQ3ZCQ2 193 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 PRR9Q5T870 116 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 RPL7L1Q6DKI1 246 aaKnown RBP7.85□□□□□ -1.15
COL4A6-205ENST00000468338 C11orf72Q8NBR9 251 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 TMED6Q8WW62 240 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 LENEPQ9Y5L5 61 aa7.85□□□□□ -1.15
COL4A6-205ENST00000468338 PGPA6NDG6 321 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 GPX1P07203 203 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 ARL14EPLP0DKL9 152 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 DEFB130BP0DP73 79 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 DEFB130AP0DP74 79 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 CDC34P49427 236 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-205ENST00000468338 DAZ2Q13117 558 aaKnown RBP7.84□□□□□ -1.15
COL4A6-205ENST00000468338 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 GNPNAT1Q96EK6 184 aaPredicted RBP7.84□□□□□ -1.15
COL4A6-205ENST00000468338 SH3BGRL3Q9H299 93 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 NOP10Q9NPE3 64 aaKnown RBP7.84□□□□□ -1.15
COL4A6-205ENST00000468338 CYTL1Q9NRR1 136 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 MUC4Q99102 2169 aa7.84□□□□□ -1.15
COL4A6-205ENST00000468338 BORCS7-ASMTA0A0B4J1R7 106 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 TAAR5O14804 337 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 HMGB3O15347 200 aaKnown RBP7.83□□□□□ -1.16
COL4A6-205ENST00000468338 ATP5G1P05496 136 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 P0DMU3 169 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 HTN3P15516 51 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
COL4A6-205ENST00000468338 ATP5G3P48201 142 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 Q6ZQT7 251 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 EIF4E3Q8N5X7 224 aaKnown RBP7.83□□□□□ -1.16
COL4A6-205ENST00000468338 POM121L12Q8N7R1 296 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 Q8TAT8 98 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 C18orf15Q96N68 181 aa7.83□□□□□ -1.16
COL4A6-205ENST00000468338 NACAE9PAV3 2078 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 ARPC5O15511 151 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 PAX4O43316 350 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 GCHFRP30047 84 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 FAM3BP58499 235 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-205ENST00000468338 FAM74A1Q5RGS3 127 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 IBA57Q5T440 356 aaKnown RBP7.82□□□□□ -1.16
COL4A6-205ENST00000468338 C15orf53Q8NAA6 179 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 ST6GAL2Q96JF0 529 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
COL4A6-205ENST00000468338 BIRC6Q9NR09 4857 aa7.82□□□□□ -1.16
COL4A6-205ENST00000468338 IGHV1OR15-1A0A075B7D0 117 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 SNURFLB1AK76 121 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 CXorf1O96002 111 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 TCL1AP56279 114 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 ZNF345Q14585 488 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 RNF212Q495C1 297 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 Q6AWC8 147 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 SSX7Q7RTT5 188 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 OR11H4Q8NGC9 324 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 CMTM2Q8TAZ6 248 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 GSN-AS1Q9NRJ2 163 aa7.81□□□□□ -1.16
COL4A6-205ENST00000468338 CTXND1A0A1B0GTU2 59 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 SERTM2A0A1B0GWG4 89 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 F5H768 121 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 Q6ZTI0 123 aa7.8□□□□□ -1.16
COL4A6-205ENST00000468338 KCNRGQ8N5I3 272 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms