RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 BAHCC1Q9P281 2608 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 NDUFA4O00483 81 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 FA2HQ7L5A8 372 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 KLHDC1Q8N7A1 406 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
BRCA1-208ENST00000468300 TCTAP57738 103 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 C5orf17Q8NAS9 161 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 UBE2E2Q96LR5 201 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 LINC00479Q96M42 142 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 EMP1P54849 157 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 GNG5P63218 68 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 NOTCH2Q04721 2471 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 GPHB5Q86YW7 130 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 EXOC3-AS1Q8N2X6 119 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 IGF2BP2-AS1Q96M15 143 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
BRCA1-208ENST00000468300 FN1P02751 2386 aaKnown RBP6.29□□□□□ -1.4
BRCA1-208ENST00000468300 MTORP42345 2549 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV3-66A0A0C4DH42 116 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGLV2-8P01709 118 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 ACTL10Q5JWF8 245 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 BPIFA4PQ86YQ2 179 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 TMEM190Q8WZ59 177 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 Q9H3A6 140 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV4OR15-8A0A075B7B6 117 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 A0A087WW49 117 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 ZNF705FA8MVS1 300 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGLV2-11P01706 119 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 ZNF705DP0CH99 300 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 ZNF705BP0CI00 300 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 RPL35AP18077 110 aaKnown RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 SLC35B1P78383 322 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 FOXL1Q12952 345 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 GRAMD2BQ96HH9 432 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV3OR16-13A0A075B7E8 117 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 A0A087X0K7 114 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV3-49A0A0A0MS15 119 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 IGHV3-74A0A0B4J1X5 117 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 ZNF727A8MUV8 499 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-208ENST00000468300 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
BRCA1-208ENST00000468300 KRTAP10-3P60369 221 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 TVP23CQ96ET8 276 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 NIPSNAP3BQ9BS92 247 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
BRCA1-208ENST00000468300 PGPA6NDG6 321 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 CRLF1O75462 422 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 MALP21145 153 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 HSD52Q0P140 79 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 TDRG1Q3Y452 100 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 C1QTNF4Q9BXJ3 329 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 NAT8Q9UHE5 227 aa6.27□□□□□ -1.41
BRCA1-208ENST00000468300 A0A087WX48 190 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 TRAV8-2A0A0B4J237 113 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 NDUFA7O95182 113 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 TMEM241Q24JQ0 296 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 DEFB136Q30KP8 78 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 C1QL4Q86Z23 238 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 DUX3Q96PT4 197 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 NIPBLQ6KC79 2804 aaeCLIP6.26□□□□□ -1.41
BRCA1-208ENST00000468300 GAGE12HA6NDE8 117 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 PEX7O00628 323 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 SOCS3O14543 225 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 CD28P10747 220 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 HLA-DMBP28068 263 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 KLF5Q13887 457 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-208ENST00000468300 IGFL4Q6B9Z1 124 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 ZNF418Q8TF45 676 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-208ENST00000468300 C4orf3Q8WVX3 66 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 GPR82Q96P67 336 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 OTORQ9NRC9 128 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 HIVEP2P31629 2446 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 ADARB2-AS1A8MUL3 147 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 C9JCJ5 164 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 K7EMT4 169 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 ISLRO14498 428 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 TCRAP04437 139 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 RPL7P18124 248 aaKnown RBP6.26□□□□□ -1.41
BRCA1-208ENST00000468300 PDE6HQ13956 83 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 METTL26Q96S19 204 aa6.26□□□□□ -1.41
BRCA1-208ENST00000468300 ZNF331Q9NQX6 463 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-208ENST00000468300 A0A087WWC5 75 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 IGHV7-4-1A0A0J9YVY3 117 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 CHEK1O14757 476 aa6.25□□□□□ -1.41
BRCA1-208ENST00000468300 PROK1P58294 105 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms