RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 HIST1H1AQ02539 215 aaPredicted RBP14.09□□□□□ -0.15
CHRNA4-203ENST00000467563 LINC00477Q96M19 166 aa14.09□□□□□ -0.15
CHRNA4-203ENST00000467563 GNB1LQ9BYB4 327 aa14.09□□□□□ -0.15
CHRNA4-203ENST00000467563 SNURFLB1AK76 121 aa14.08□□□□□ -0.15
CHRNA4-203ENST00000467563 TMEM136Q6ZRR5 245 aa14.08□□□□□ -0.15
CHRNA4-203ENST00000467563 RBPMS2Q6ZRY4 209 aaKnown RBP14.08□□□□□ -0.15
CHRNA4-203ENST00000467563 TMSB15BA0A087X1C1 80 aa14.08□□□□□ -0.16
CHRNA4-203ENST00000467563 ADARB2-AS1A8MUL3 147 aa14.08□□□□□ -0.16
CHRNA4-203ENST00000467563 FOXA3P55318 350 aaPredicted RBP14.08□□□□□ -0.16
CHRNA4-203ENST00000467563 PSMG4Q5JS54 123 aa14.08□□□□□ -0.16
CHRNA4-203ENST00000467563 TMEM189A5PLL7 270 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 FABP5P3A8MUU1 101 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 NDUFA6P56556 154 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 KRTAP10-3P60369 221 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 ZNF575Q86XF7 245 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 MRPL18Q9H0U6 180 aaKnown RBP14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 LENEPQ9Y5L5 61 aa14.07□□□□□ -0.16
CHRNA4-203ENST00000467563 A0A1B0GXF2 115 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 PRR9Q5T870 116 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 GDF5OSQ5U4N7 250 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 WNK1Q9H4A3 2382 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 SNRPD3P62318 126 aaKnown RBP14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 WDR73Q6P4I2 378 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 ZFAND2AQ8N6M9 145 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 FAM19A4Q96LR4 140 aa14.06□□□□□ -0.16
CHRNA4-203ENST00000467563 RAB4BP61018 213 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 RASL11AQ6T310 242 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 Q6ZQT7 251 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 ATP5L2Q7Z4Y8 100 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 TMEM61Q8N0U2 210 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 PAFAH1B2P68402 229 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 COX19Q49B96 90 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 C11orf21Q9P2W6 132 aa14.05□□□□□ -0.16
CHRNA4-203ENST00000467563 ORM1P02763 201 aa14.04□□□□□ -0.16
CHRNA4-203ENST00000467563 MT-ND6P03923 174 aa14.04□□□□□ -0.16
CHRNA4-203ENST00000467563 CAMPP49913 170 aa14.04□□□□□ -0.16
CHRNA4-203ENST00000467563 DEFB114Q30KQ6 69 aa14.04□□□□□ -0.16
CHRNA4-203ENST00000467563 DYNLRB2Q8TF09 96 aa14.04□□□□□ -0.16
CHRNA4-203ENST00000467563 SORL1Q92673 2214 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 J3KRW8 73 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 UBE2CO00762 179 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 CD33P20138 364 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 NSUN5P1Q3KNT7 163 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 HLA-DQA1P01909 254 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
CHRNA4-203ENST00000467563 XKRY2A2RUG3 117 aa14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 ARMS2P0C7Q2 107 aa14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 HBBP68871 147 aa14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 KIR3DS1Q14943 382 aa14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 CD300EQ496F6 205 aaPredicted RBP14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 TPPP3Q9BW30 176 aa14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 NIPBLQ6KC79 2804 aaeCLIP14.02□□□□□ -0.16
CHRNA4-203ENST00000467563 IGKV3D-20A0A0C4DH25 116 aa14.02□□□□□ -0.17
CHRNA4-203ENST00000467563 A0A0J9YX75 114 aa14.02□□□□□ -0.17
CHRNA4-203ENST00000467563 CYSRT1A8MQ03 144 aa14.02□□□□□ -0.17
CHRNA4-203ENST00000467563 PRR31Q5SQ13 230 aa14.02□□□□□ -0.17
CHRNA4-203ENST00000467563 CRISP2P16562 243 aa14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 HOXA5P20719 270 aa14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 RPS20P60866 119 aaKnown RBP14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 SLAQ13239 276 aa14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 GFI1BQ5VTD9 330 aa14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 Q6AWC8 147 aa14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 SSBP4Q9BWG4 385 aaPredicted RBP14.01□□□□□ -0.17
CHRNA4-203ENST00000467563 TRBV7-9A0A0J9YWB2 115 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 A0A1B0GUT8 65 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 GRIFINA4D1Z8 144 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 KIAA1644Q3SXP7 199 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 LYZL1Q6UWQ5 148 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 APRG1Q8IVJ8 170 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 TRAV2A0A0B4J234 112 aa14□□□□□ -0.17
CHRNA4-203ENST00000467563 APCSP02743 223 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 GPX1P07203 203 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 IGLC6P0CF74 106 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 JMJD1CQ15652 2540 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 NDUFA11Q86Y39 141 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 FER1L6-AS1Q8NA97 138 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 SIGLEC8Q9NYZ4 499 aa13.99□□□□□ -0.17
CHRNA4-203ENST00000467563 RNASE4P34096 147 aaKnown RBP13.98□□□□□ -0.17
CHRNA4-203ENST00000467563 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
CHRNA4-203ENST00000467563 MUC21A0A0G2JKD1 596 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 MUC21A0A140T8X8 626 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 A0A1B0GUS0 222 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 KLLNB2CW77 178 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 IGKV3-20P01619 116 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 CTRLP40313 264 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 DEFB131AP59861 70 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 COA6Q5JTJ3 125 aaKnown RBP13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 MUC21Q5SSG8 566 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 FOXI2Q6ZQN5 318 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 TRAV21A0A0B4J279 112 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 IFITM10A6NMD0 228 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 SSTP61278 116 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 RIGQ13278 110 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 ZNF256Q9Y2P7 627 aaPredicted RBP13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 AGRNO00468 2067 aa13.97□□□□□ -0.17
CHRNA4-203ENST00000467563 PDZD11Q5EBL8 140 aa13.96□□□□□ -0.17
CHRNA4-203ENST00000467563 SPAG8Q99932 426 aaPredicted RBP13.96□□□□□ -0.17
CHRNA4-203ENST00000467563 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
CHRNA4-203ENST00000467563 ODF3Q96PU9 254 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms