RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 TNFSF18Q9UNG2 199 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 DNAH2Q9P225 4427 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 DNAH17Q9UFH2 4485 aa12.68□□□□□ -0.38
CGREF1-208ENST00000467539 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 H3BNG1 76 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 SPINK4O60575 86 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 HOXA5P20719 270 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
CGREF1-208ENST00000467539 TCL1AP56279 114 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 OR2T35Q8NGX2 323 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
CGREF1-208ENST00000467539 GNPNAT1Q96EK6 184 aaPredicted RBP12.67□□□□□ -0.38
CGREF1-208ENST00000467539 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
CGREF1-208ENST00000467539 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
CGREF1-208ENST00000467539 ARL14EPLP0DKL9 152 aa12.66□□□□□ -0.38
CGREF1-208ENST00000467539 CCL18P55774 89 aa12.66□□□□□ -0.38
CGREF1-208ENST00000467539 Q6AWC8 147 aa12.66□□□□□ -0.38
CGREF1-208ENST00000467539 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
CGREF1-208ENST00000467539 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
CGREF1-208ENST00000467539 TRGV1A0A0A0MS02 117 aa12.65□□□□□ -0.38
CGREF1-208ENST00000467539 BORCS7-ASMTA0A0B4J1R7 106 aa12.65□□□□□ -0.38
CGREF1-208ENST00000467539 RPL7L1Q6DKI1 246 aaKnown RBP12.65□□□□□ -0.38
CGREF1-208ENST00000467539 ST6GAL2Q96JF0 529 aa12.65□□□□□ -0.38
CGREF1-208ENST00000467539 ACTR3CQ9C0K3 210 aaPredicted RBP12.65□□□□□ -0.38
CGREF1-208ENST00000467539 RTL8CO15255 209 aa12.64□□□□□ -0.39
CGREF1-208ENST00000467539 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
CGREF1-208ENST00000467539 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
CGREF1-208ENST00000467539 SH3BGRL3Q9H299 93 aa12.64□□□□□ -0.39
CGREF1-208ENST00000467539 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
CGREF1-208ENST00000467539 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 G3V3Q6 166 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 CXorf1O96002 111 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 GCHFRP30047 84 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 RPH3ALQ9UNE2 315 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 LINC00588Q9Y4M8 146 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 HECTD4Q9Y4D8 3996 aa12.63□□□□□ -0.39
CGREF1-208ENST00000467539 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 SERTM2A0A1B0GWG4 89 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 TAAR5O14804 337 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 MUC21Q5SSG8 566 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 FAM159AQ6UWV7 190 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 TVP23CQ96ET8 276 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
CGREF1-208ENST00000467539 SUMO1P63165 101 aaKnown RBP12.61□□□□□ -0.39
CGREF1-208ENST00000467539 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 VSIG2Q96IQ7 327 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 SPXQ9BT56 116 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
CGREF1-208ENST00000467539 TRAV8-1A0A0A6YYK1 113 aa12.6□□□□□ -0.39
CGREF1-208ENST00000467539 PRSS29PA6NIE9 313 aa12.6□□□□□ -0.39
CGREF1-208ENST00000467539 GNG5P63218 68 aa12.6□□□□□ -0.39
CGREF1-208ENST00000467539 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
CGREF1-208ENST00000467539 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
CGREF1-208ENST00000467539 TRGV11A0A075B6L2 103 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 A0A1B0GVY2 172 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 TCRAP04437 139 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 SLAQ13239 276 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 ESRGQ1W209 222 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 C1orf134Q5TEV5 83 aa12.59□□□□□ -0.39
CGREF1-208ENST00000467539 MRPL16Q9NX20 251 aaKnown RBP12.59□□□□□ -0.39
CGREF1-208ENST00000467539 NBDYA0A0U1RRE5 68 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 A0A1W2PRE2 83 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 K7EQM0 130 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 GNRH2O43555 120 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 TMEM183BQ1AE95 376 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 TMEM183AQ8IXX5 376 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 RASL10AQ92737 203 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 Q9H8V8 135 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 CYTL1Q9NRR1 136 aa12.58□□□□□ -0.4
CGREF1-208ENST00000467539 MUC4Q99102 2169 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 A0A096LPF7 62 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 CTXND1A0A1B0GTU2 59 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 ARPC5O15511 151 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 FHL2Q14192 279 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 ZNF726P1Q15940 193 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 PSG8Q9UQ74 426 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 HHLA3Q9XRX5 114 aa12.57□□□□□ -0.4
CGREF1-208ENST00000467539 FBLL1A6NHQ2 334 aaKnown RBP12.56□□□□□ -0.4
CGREF1-208ENST00000467539 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 PAX4O43316 350 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 IGLV2-11P01706 119 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 IQCF2Q8IXL9 164 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 KCNS1Q96KK3 526 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 NDFIP1Q9BT67 221 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 UPK3BQ9BT76 320 aa12.56□□□□□ -0.4
CGREF1-208ENST00000467539 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
CGREF1-208ENST00000467539 IGHV3-53P01767 116 aa12.55□□□□□ -0.4
CGREF1-208ENST00000467539 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
CGREF1-208ENST00000467539 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms