RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 FOXF1Q12946 379 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 C12orf73Q69YU5 71 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 Q8NAQ8 132 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 LINC00301Q8NCQ3 95 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 Q96M85 177 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 SMIM7Q9BQ49 75 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 SLC50A1Q9BRV3 221 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 SCRT1Q9BWW7 348 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 CST11Q9H112 138 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 CDK5RAP2Q96SN8 1893 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 PLIN4Q96Q06 1357 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 MYO10Q9HD67 2058 aa2.19□□□□□ -2.06
VPS50-209ENST00000467326 CASZ1Q86V15 1759 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 HFM1A2PYH4 1435 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 ABCC3O15438 1527 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 ARHGEF28Q8N1W1 1705 aaKnown RBP2.18□□□□□ -2.06
VPS50-209ENST00000467326 IGLV3-12A0A075B6K2 115 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 K7EP34 96 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 PITX3O75364 302 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 GYPBP06028 91 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 MGST1P10620 155 aaKnown RBP2.18□□□□□ -2.06
VPS50-209ENST00000467326 PIPP12273 146 aaPredicted RBP2.18□□□□□ -2.06
VPS50-209ENST00000467326 ZNF22P17026 224 aaPredicted RBP2.18□□□□□ -2.06
VPS50-209ENST00000467326 SEC11AP67812 179 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 ALKAL2Q6UX46 152 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 Q6ZQT0 140 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 ARPINQ7Z6K5 226 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 Q8N2B8 174 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 VSTM2AQ8TAG5 236 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 SPTSSAQ969W0 71 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 MUCL1Q96DR8 90 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 NABP2Q9BQ15 211 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 MAGI2Q86UL8 1455 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 FRMPD1Q5SYB0 1578 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 KDM5AP29375 1690 aaKnown RBP2.18□□□□□ -2.06
VPS50-209ENST00000467326 MYH11P35749 1972 aa2.18□□□□□ -2.06
VPS50-209ENST00000467326 CASKIN1Q8WXD9 1431 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 KIAA1551Q9HCM1 1747 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 TRAV40A0A0B4J280 105 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 CRPP02741 224 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 CLPSP04118 112 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 IL5P05113 134 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 DEFA4P12838 97 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 ATP5EP56381 51 aaPredicted RBP2.17□□□□□ -2.06
VPS50-209ENST00000467326 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 Q0VG73 95 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 NNATQ16517 81 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 LINC00483Q53H64 154 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 MIC13Q5XKP0 118 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 TMEM254Q8TBM7 123 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 S100A16Q96FQ6 103 aaKnown RBP2.17□□□□□ -2.06
VPS50-209ENST00000467326 MGST2Q99735 147 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 CXCL16Q9H2A7 254 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 TMEM242Q9NWH2 141 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 MINOS1-NBL1R4GNA1 71 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 PLA2R1Q13018 1463 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 N4BP2Q86UW6 1770 aaPredicted RBP2.17□□□□□ -2.06
VPS50-209ENST00000467326 OBSL1O75147 1896 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 DSCAMO60469 2012 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 MYH7P12883 1935 aa2.17□□□□□ -2.06
VPS50-209ENST00000467326 ATG2BQ96BY7 2078 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 ADGRB1O14514 1584 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 GLI3P10071 1580 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 SCAF11Q99590 1463 aaKnown RBP2.16□□□□□ -2.06
VPS50-209ENST00000467326 TRAV3A0A0B4J244 114 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 A0A0J9YX75 114 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 HMSDA8MTL9 139 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 NDUFB6O95139 128 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 KRTDAPP60985 99 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 Q5BKY6 102 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 ZNF826PQ6ZT77 177 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 LYPD6Q86Y78 171 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 Q8IYB0 196 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 Q8N814 137 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 TSLPQ969D9 159 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 ST20Q9HBF5 79 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 NPVFQ9HCQ7 196 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 CACFD1Q9UGQ2 172 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 NUP98P52948 1817 aa2.16□□□□□ -2.06
VPS50-209ENST00000467326 AKAP12Q02952 1782 aa2.15□□□□□ -2.06
VPS50-209ENST00000467326 SVILO95425 2214 aa2.15□□□□□ -2.06
VPS50-209ENST00000467326 ERVK-7P63135 1459 aa2.15□□□□□ -2.06
VPS50-209ENST00000467326 IGLV10-54A0A075B6I4 117 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 IGKV2D-26A0A0A0MRZ7 120 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 LOC107984156A0A0G2JMH3 177 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 KANTRA0A1W2PQU2 76 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 IGLC7A0M8Q6 106 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 H3BRM9 83 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 SFT2D2O95562 160 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 NMBP08949 121 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 HINT1P49773 126 aaPredicted RBP2.15□□□□□ -2.07
VPS50-209ENST00000467326 DSCR4P56555 118 aaPredicted RBP2.15□□□□□ -2.07
VPS50-209ENST00000467326 ROMO1P60602 79 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 ERHP84090 104 aaKnown RBP2.15□□□□□ -2.07
VPS50-209ENST00000467326 EIF4EBP1Q13541 118 aaPredicted RBP2.15□□□□□ -2.07
VPS50-209ENST00000467326 ZNF345Q14585 488 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 C2orf82Q6UX34 121 aa2.15□□□□□ -2.07
VPS50-209ENST00000467326 CASC2Q6XLA1 102 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms