RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 IGLC2P0DOY2 106 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 DCANP1Q8TF63 244 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 FMC1Q96HJ9 113 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
DDX56-208ENST00000467318 SORL1Q92673 2214 aa11.05□□□□□ -0.64
DDX56-208ENST00000467318 PGPA6NDG6 321 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 PDE6HQ13956 83 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 BEAN1Q3B7T3 259 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 K7EQG2 157 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
DDX56-208ENST00000467318 GRIFINA4D1Z8 144 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 ZNF253O75346 499 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 APCSP02743 223 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 ID1P41134 155 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 TFPI2P48307 235 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
DDX56-208ENST00000467318 CT83Q5H943 113 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 C17orf77Q96MU5 243 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 SAMD10Q9BYL1 202 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 OTORQ9NRC9 128 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 ZNF492Q9P255 531 aa11.03□□□□□ -0.64
DDX56-208ENST00000467318 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 SERF1AO75920 110 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 SNRPD3P62318 126 aaKnown RBP11.02□□□□□ -0.64
DDX56-208ENST00000467318 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.64
DDX56-208ENST00000467318 GTSCR1Q86UQ5 136 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 TSKUQ8WUA8 353 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 C16orf92Q96LL3 132 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.64
DDX56-208ENST00000467318 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
DDX56-208ENST00000467318 SOCS3O14543 225 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 NUPR1O60356 82 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
DDX56-208ENST00000467318 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
DDX56-208ENST00000467318 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 NOTCH1P46531 2555 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 A8MWL6 223 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 SNRPCP09234 159 aaKnown RBP11.01□□□□□ -0.65
DDX56-208ENST00000467318 KRTAP10-11P60412 298 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 PSG9Q00887 426 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
DDX56-208ENST00000467318 FAM231BA6NCW3 169 aa11□□□□□ -0.65
DDX56-208ENST00000467318 GPX1P07203 203 aa11□□□□□ -0.65
DDX56-208ENST00000467318 TCL1AP56279 114 aa11□□□□□ -0.65
DDX56-208ENST00000467318 MRPL54Q6P161 138 aaKnown RBP11□□□□□ -0.65
DDX56-208ENST00000467318 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
DDX56-208ENST00000467318 MLST8Q9BVC4 326 aa11□□□□□ -0.65
DDX56-208ENST00000467318 GFRA4Q9GZZ7 299 aa11□□□□□ -0.65
DDX56-208ENST00000467318 Q9H3A6 140 aa11□□□□□ -0.65
DDX56-208ENST00000467318 TRAV34A0A0B4J273 112 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 SPINK4O60575 86 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 TCRAP04437 139 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 NUP35Q8NFH5 326 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 OR4B1Q8NGF8 309 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 KCNS1Q96KK3 526 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
DDX56-208ENST00000467318 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 H3BTX0 84 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 K7EQM0 130 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 LTAP01374 205 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 CD7P09564 240 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 MRPL52Q86TS9 123 aaKnown RBP10.98□□□□□ -0.65
DDX56-208ENST00000467318 NHLRC2Q8NBF2 726 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 C2orf88Q9BSF0 95 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 RPP21Q9H633 154 aaKnown RBP10.98□□□□□ -0.65
DDX56-208ENST00000467318 NBEAL1Q6ZS30 2694 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 P01737 135 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 SRIP30626 198 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 LINC00310P59036 64 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 GNG5P63218 68 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 Q6ZWC4 215 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
DDX56-208ENST00000467318 KIR2DL5BA0A0G2JN68 375 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 KIR2DL5BA0A0G2JPC4 375 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 DEFB131AP59861 70 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 PSG3Q16557 428 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 PRR27Q6MZM9 219 aa10.97□□□□□ -0.65
DDX56-208ENST00000467318 KIR2DL5AQ8N109 375 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms