RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 U3KQA8 63 aa-0.58□□□□□ -2.5
SMC4-207ENST00000467263 USP54Q70EL1 1684 aa-0.59□□□□□ -2.5
SMC4-207ENST00000467263 ARL5CA6NH57 179 aa-0.59□□□□□ -2.5
SMC4-207ENST00000467263 TMEM210A6NLX4 147 aa-0.59□□□□□ -2.5
SMC4-207ENST00000467263 FABP2P12104 132 aa-0.59□□□□□ -2.5
SMC4-207ENST00000467263 OR5H6Q8NGV6 325 aa-0.59□□□□□ -2.5
SMC4-207ENST00000467263 MYH3P11055 1940 aa-0.6□□□□□ -2.5
SMC4-207ENST00000467263 FGD6Q6ZV73 1430 aa-0.6□□□□□ -2.51
SMC4-207ENST00000467263 HIGD1CA8MV81 97 aa-0.6□□□□□ -2.51
SMC4-207ENST00000467263 ADGBQ8N7X0 1667 aa-0.6□□□□□ -2.51
SMC4-207ENST00000467263 ANKRD31Q8N7Z5 1873 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 IGF2P01344 180 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 GLRXP35754 106 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 LRTM1Q9HBL6 345 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 FKBP11Q9NYL4 201 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 MED11Q9P086 117 aa-0.61□□□□□ -2.51
SMC4-207ENST00000467263 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.61□□□□□ -2.51
SMC4-207ENST00000467263 CACNA1AO00555 2505 aa-0.62□□□□□ -2.51
SMC4-207ENST00000467263 A0A096LNT2 108 aa-0.62□□□□□ -2.51
SMC4-207ENST00000467263 TPT1P13693 172 aaKnown RBP-0.62□□□□□ -2.51
SMC4-207ENST00000467263 GNG3P63215 75 aa-0.62□□□□□ -2.51
SMC4-207ENST00000467263 SMIM20Q8N5G0 67 aa-0.62□□□□□ -2.51
SMC4-207ENST00000467263 TMEM14BQ9NUH8 114 aa-0.62□□□□□ -2.51
SMC4-207ENST00000467263 TMEM30CPA0ZSE6 113 aa-0.63□□□□□ -2.51
SMC4-207ENST00000467263 FAM213BQ8TBF2 198 aa-0.63□□□□□ -2.51
SMC4-207ENST00000467263 ISOC1Q96CN7 298 aa-0.63□□□□□ -2.51
SMC4-207ENST00000467263 PRELID3AQ96N28 172 aa-0.63□□□□□ -2.51
SMC4-207ENST00000467263 TENM4Q6N022 2769 aa-0.63□□□□□ -2.51
SMC4-207ENST00000467263 TRAPPC8Q9Y2L5 1435 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 TPST1O60507 370 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 IGKCP01834 107 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 DNAJB13P59910 316 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 MAXP61244 160 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 RPL19P84098 196 aaKnown RBP-0.64□□□□□ -2.51
SMC4-207ENST00000467263 KLKP1Q107X0 134 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 BIN3Q9NQY0 253 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 TECPR2O15040 1411 aa-0.64□□□□□ -2.51
SMC4-207ENST00000467263 HMCN2Q8NDA2 5059 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 GABARAPH6UMI1 98 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 CDC42EP2O14613 210 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 SAA1P0DJI8 122 aaPredicted RBP-0.65□□□□□ -2.51
SMC4-207ENST00000467263 MPC1LP0DKB6 136 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 BCL2P10415 239 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 IL7P13232 177 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 IQCJQ1A5X6 159 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 LYPD5Q6UWN5 251 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 OR8J3Q8NGG0 315 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 LAMTOR3Q9UHA4 124 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 MPC1Q9Y5U8 109 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 NUBP2Q9Y5Y2 271 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 DLC1Q96QB1 1528 aa-0.65□□□□□ -2.51
SMC4-207ENST00000467263 NUP210Q8TEM1 1887 aaPredicted RBP-0.65□□□□□ -2.51
SMC4-207ENST00000467263 ABCA4P78363 2273 aa-0.66□□□□□ -2.51
SMC4-207ENST00000467263 TRDV1A0A1B0GX56 115 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 TAS2R41P59536 307 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 DYDC1Q8WWB3 177 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 CHMP6Q96FZ7 201 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 RREB1Q92766 1687 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 SPAG17Q6Q759 2223 aa-0.66□□□□□ -2.52
SMC4-207ENST00000467263 EDF1O60869 148 aaKnown RBP-0.67□□□□□ -2.52
SMC4-207ENST00000467263 S100A6P06703 90 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 SDC2P34741 201 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 CCSMST1Q4G0I0 132 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 FAM24BQ8N5W8 94 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 C19orf12Q9NSK7 152 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 UFC1Q9Y3C8 167 aa-0.67□□□□□ -2.52
SMC4-207ENST00000467263 MUC12Q9UKN1 5478 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 MAP2P11137 1827 aaKnown RBP-0.68□□□□□ -2.52
SMC4-207ENST00000467263 TMEM189A5PLL7 270 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 H7BYZ3 331 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 ETV6P41212 452 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 GTF2A1P52655 376 aaPredicted RBP-0.68□□□□□ -2.52
SMC4-207ENST00000467263 TEX29Q8N6K0 151 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 DMAC1Q96GE9 116 aa-0.68□□□□□ -2.52
SMC4-207ENST00000467263 CPDO75976 1380 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 MED13LQ71F56 2210 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 A0A0G2JMM0 328 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 LOC107986453A0A1B0GWG9 222 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 RHOHQ15669 191 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 TMED4Q7Z7H5 227 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 STX19Q8N4C7 294 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 MNS1Q8NEH6 495 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 PRR15LQ9BU68 103 aa-0.69□□□□□ -2.52
SMC4-207ENST00000467263 TCOF1Q13428 1488 aaKnown RBP-0.69□□□□□ -2.52
SMC4-207ENST00000467263 CDK12Q9NYV4 1490 aaPredicted RBP-0.69□□□□□ -2.52
SMC4-207ENST00000467263 DLEC1Q9Y238 1755 aa-0.7□□□□□ -2.52
SMC4-207ENST00000467263 TCTAP57738 103 aa-0.7□□□□□ -2.52
SMC4-207ENST00000467263 COX6A2Q02221 97 aa-0.7□□□□□ -2.52
SMC4-207ENST00000467263 Q5XG85 94 aa-0.7□□□□□ -2.52
SMC4-207ENST00000467263 DSCR8Q96T75 97 aa-0.7□□□□□ -2.52
SMC4-207ENST00000467263 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.7□□□□□ -2.52
SMC4-207ENST00000467263 TRBV27A0A0K0K1C4 114 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 IFITM5A6NNB3 132 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 CCKP06307 115 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 SLC25A4P12235 298 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 S100A11P31949 105 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 BASP1P80723 227 aaKnown RBP-0.71□□□□□ -2.52
SMC4-207ENST00000467263 LINC00305Q7Z4B0 112 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 F5P12259 2224 aa-0.71□□□□□ -2.52
SMC4-207ENST00000467263 CADP27708 2225 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms