RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 FAM74A7A6NL05 159 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 MUC21Q5SSG8 566 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 EIF5AL1Q6IS14 154 aaKnown RBP8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 PRNTQ86SH4 94 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 SLC51BQ86UW2 128 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 LINC00479Q96M42 142 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 TREM1Q9NP99 234 aa8.59□□□□□ -1.03
SHROOM3-202ENST00000466541 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 PAGE4O60829 102 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 DPPA3Q6W0C5 159 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 ZNF493Q6ZR52 646 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 RNASE8Q8TDE3 154 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 TMEM263Q8WUH6 116 aaKnown RBP8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 C8orf49Q96NF6 230 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 PSG8Q9UQ74 426 aa8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
SHROOM3-202ENST00000466541 KMT2CQ8NEZ4 4911 aaKnown RBP8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 TEX48A0A1B0GUV7 120 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 PLAC8L1A1L4L8 177 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 PEX7O00628 323 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 NMBP08949 121 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 ATP5G3P48201 142 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 EIF4E3Q8N5X7 224 aaKnown RBP8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 ARL6IP6Q8N6S5 226 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 MBD3L1Q8WWY6 194 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 ATG101Q9BSB4 218 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 GSN-AS1Q9NRJ2 163 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
SHROOM3-202ENST00000466541 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 SERTM2A0A1B0GWG4 89 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GAGE12BA1L429 117 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 LYRM9A8MSI8 78 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GAGE7O76087 117 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 LY6G6CO95867 125 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GAGE12FP0CL80 117 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GAGE12GP0CL81 117 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GAGE12IP0CL82 117 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 CCL20P78556 96 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 FLI1Q01543 452 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 NKX6-2Q9C056 277 aaPredicted RBP8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 LENEPQ9Y5L5 61 aa8.56□□□□□ -1.04
SHROOM3-202ENST00000466541 GCGP01275 180 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 IGLV2-11P01706 119 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 SULT1A2P50226 295 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 PPT1P50897 306 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 RAB5CP51148 216 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 TMEM183BQ1AE95 376 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 TMEM183AQ8IXX5 376 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 TMEM75Q8N9X5 138 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 ZNF680Q8NEM1 530 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 LYSTQ99698 3801 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 KLF12Q9Y4X4 402 aa8.55□□□□□ -1.04
SHROOM3-202ENST00000466541 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 LCE6AA0A183 80 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 F5H768 121 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 AKR1C3P42330 323 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 Q6AWC8 147 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 ALKAL2Q6UX46 152 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 Q6ZTI0 123 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 ARL2-SNX15V9GYD0 113 aa8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
SHROOM3-202ENST00000466541 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 TEX46H3BTG2 121 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 GNRH2O43555 120 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 UBE2G1P62253 170 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 ANXA2RQ3ZCQ2 193 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 SMUG1Q53HV7 270 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 C11orf72Q8NBR9 251 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
SHROOM3-202ENST00000466541 TRGV2A0A075B6R0 118 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 ZNF415Q09FC8 603 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 Q86TA4 180 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 LINC00467Q9BRT7 94 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 NDUFAF3Q9BU61 184 aa8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 MRPL16Q9NX20 251 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 DYNC2H1Q8NCM8 4307 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-202ENST00000466541 FBLL1A6NHQ2 334 aaKnown RBP8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 ATP5G1P05496 136 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 TCL1AP56279 114 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 OR5I1Q13606 314 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 NHLRC2Q8NBF2 726 aa8.51□□□□□ -1.05
SHROOM3-202ENST00000466541 FMC1Q96HJ9 113 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms