RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-208	ENST00000466101	CBY3	A6NI87	242 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	UMAD1	C9J7I0	102 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	RGS13	O14921	159 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	LY6G6C	O95867	125 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	ARL6IP6	Q8N6S5	226 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	STOML3	Q8TAV4	291 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	EPDR1	Q9UM22	224 aa		12	□□□□□ -0.49
CCNL1-208	ENST00000466101	IGHV4-4	A0A075B6R2	117 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	SNURFL	B1AK76	121 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101		F6UZH7	168 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	IFNA7	P01567	189 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	MUC21	Q5SSG8	566 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	EIF4E3	Q8N5X7	224 aa	Known RBP	11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	SFT2D1	Q8WV19	159 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	LINC00476	Q8WZB0	136 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	TVP23C	Q96ET8	276 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	TP53TG3	Q9ULZ0	132 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	LENEP	Q9Y5L5	61 aa		11.99	□□□□□ -0.49
CCNL1-208	ENST00000466101	IGHV1OR15-1	A0A075B7D0	117 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	SERTM2	A0A1B0GWG4	89 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	FAM74A7	A6NL05	159 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101		K7EQM0	130 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	TREM1	Q9NP99	234 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	GSN-AS1	Q9NRJ2	163 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	APLN	Q9ULZ1	77 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	LYST	Q99698	3801 aa		11.98	□□□□□ -0.49
CCNL1-208	ENST00000466101	PRNT	Q86SH4	94 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	CYB561D1	Q8N8Q1	229 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	LINC00479	Q96M42	142 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	C8orf49	Q96NF6	230 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	LINC00467	Q9BRT7	94 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	ATG101	Q9BSB4	218 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	PSG8	Q9UQ74	426 aa		11.97	□□□□□ -0.49
CCNL1-208	ENST00000466101	TRAV34	A0A0B4J273	112 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	H2AFB1	P0C5Y9	115 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	FLI1	Q01543	452 aa	Predicted RBP	11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	ANXA2R	Q3ZCQ2	193 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	ZFP69	Q49AA0	526 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	CST9LP1	Q5W188	147 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101		Q6AWC8	147 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	DPPA3	Q6W0C5	159 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	C9orf62	Q8N4C0	152 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	C11orf72	Q8NBR9	251 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	MBD3L1	Q8WWY6	194 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	NDFIP1	Q9BT67	221 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	NAGK	Q9UJ70	344 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	KLF12	Q9Y4X4	402 aa		11.96	□□□□□ -0.49
CCNL1-208	ENST00000466101	GAGE12B	A1L429	117 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	PEX7	O00628	323 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	PAGE4	O60829	102 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	GAGE7	O76087	117 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	IGLV2-11	P01706	119 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	GAGE12F	P0CL80	117 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	GAGE12G	P0CL81	117 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	GAGE12I	P0CL82	117 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	TMEM75	Q8N9X5	138 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101	ZNF680	Q8NEM1	530 aa		11.95	□□□□□ -0.5
CCNL1-208	ENST00000466101		F5H768	121 aa		11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	ATP5G3	P48201	142 aa		11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	TCTA	P57738	103 aa		11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	EIF5AL1	Q6IS14	154 aa	Known RBP	11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	SLC51B	Q86UW2	128 aa		11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	NDUFAF3	Q9BU61	184 aa		11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	NKX6-2	Q9C056	277 aa	Predicted RBP	11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	PLEC	Q15149	4684 aa	Known RBP	11.94	□□□□□ -0.5
CCNL1-208	ENST00000466101	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	ATP5G1	P05496	136 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	TMEM183B	Q1AE95	376 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	FAM159A	Q6UWV7	190 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101		Q6ZTI0	123 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	TMEM183A	Q8IXX5	376 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	RYR3	Q15413	4870 aa		11.93	□□□□□ -0.5
CCNL1-208	ENST00000466101	TRGV1	A0A0A0MS02	117 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	TRAV21	A0A0B4J279	112 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	ZNF80	P51504	273 aa	Predicted RBP	11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	NKX2-5	P52952	324 aa	Predicted RBP	11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	TCL1A	P56279	114 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	DAZ2	Q13117	558 aa	Known RBP	11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	IBA57	Q5T440	356 aa	Known RBP	11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	LGALS9C	Q6DKI2	356 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	TMEM88	Q6PEY1	159 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	MDFIC	Q9P1T7	246 aa		11.92	□□□□□ -0.5
CCNL1-208	ENST00000466101	GCG	P01275	180 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	SULT1A2	P50226	295 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	PPT1	P50897	306 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	RAB5C	P51148	216 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	CCL20	P78556	96 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	ZNF415	Q09FC8	603 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	LINC00612	Q8N6U2	182 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	HIST1H2BA	Q96A08	127 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	MRPL16	Q9NX20	251 aa	Known RBP	11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	ARL2-SNX15	V9GYD0	113 aa		11.91	□□□□□ -0.5
CCNL1-208	ENST00000466101	GNRH2	O43555	120 aa		11.9	□□□□□ -0.5
CCNL1-208	ENST00000466101	SMUG1	Q53HV7	270 aa		11.9	□□□□□ -0.5
CCNL1-208	ENST00000466101		Q86TA4	180 aa		11.9	□□□□□ -0.5
CCNL1-208	ENST00000466101	RYR2	Q92736	4967 aa		11.9	□□□□□ -0.5
CCNL1-208	ENST00000466101	ALMS1	Q8TCU4	4167 aa		11.9	□□□□□ -0.5
CCNL1-208	ENST00000466101	TRGV11	A0A075B6L2	103 aa		11.89	□□□□□ -0.51
CCNL1-208	ENST00000466101	TRGV2	A0A075B6R0	118 aa		11.89	□□□□□ -0.51
CCNL1-208	ENST00000466101	FBLL1	A6NHQ2	334 aa	Known RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms