RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 CEACAM4O75871 244 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 TCTEX1D4Q5JR98 221 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 CD59P13987 128 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 MBD3L4A6NDZ8 208 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 MBD3L3A6NE82 208 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 MBD3L5A6NJ08 208 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 DYNAPQ8N1N2 210 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 MBD3L2Q8NHZ7 208 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 CFHR4Q92496 578 aa10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 SRSF8Q9BRL6 282 aaKnown RBP10.81□□□□□ -0.68
TGFBR3-204ENST00000465892 BDP1A6H8Y1 2624 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 SHISA9B4DS77 424 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 BUB1B-PAK6H3BSN5 160 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 IL17RELQ6ZVW7 336 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 Q8N8P6 123 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 RNF183Q96D59 192 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 IGHG4P01861 327 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 SRSF1Q07955 248 aaKnown RBP eCLIP10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 LAGE3Q14657 143 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 DEFB109BQ30KR1 87 aa10.8□□□□□ -0.68
TGFBR3-204ENST00000465892 FABP5P3A8MUU1 101 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 OR11H12B2RN74 326 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 H3BVH4 76 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 BSPH1Q075Z2 132 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 OR11H1Q8NG94 326 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 OR11H2Q8NH07 326 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 IGLV2-18A0A075B6J9 118 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 A0A087WX48 190 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 TIMM23O14925 209 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 SMAD5-AS1Q9Y6J3 95 aa10.79□□□□□ -0.68
TGFBR3-204ENST00000465892 VSTM5A8MXK1 200 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 J3KRW8 73 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 HES1Q14469 280 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 C11orf21Q9P2W6 132 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 MYMXA0A1B0GTQ4 84 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 PDE6HQ13956 83 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 CFAP126Q5VTH2 177 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 KIR2DL4Q99706 377 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 BSNQ9UPA5 3926 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 IGHV3-49A0A0A0MS15 119 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 TMEM238LA0A1B0GVL6 79 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 EMP1P54849 157 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 Q6ZUT4 128 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 ONECUT1Q9UBC0 465 aa10.78□□□□□ -0.68
TGFBR3-204ENST00000465892 IGKV3D-20A0A0C4DH25 116 aa10.77□□□□□ -0.69
TGFBR3-204ENST00000465892 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
TGFBR3-204ENST00000465892 CDX4O14627 284 aaPredicted RBP10.77□□□□□ -0.69
TGFBR3-204ENST00000465892 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
TGFBR3-204ENST00000465892 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 LGALS1P09382 135 aaKnown RBP10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 TAL2Q16559 108 aa10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 DYNLRB1Q9NP97 96 aa10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 SPTBN2O15020 2390 aa10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 RPL7P18124 248 aaKnown RBP10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 RAXQ9Y2V3 346 aa10.76□□□□□ -0.69
TGFBR3-204ENST00000465892 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 TMEM78Q5T7P6 136 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 NRACQ8N912 160 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 CARD19Q96LW7 228 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 SPTBN1Q01082 2364 aaKnown RBP10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 LINC01546A6NGU7 62 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 TNFRSF13BO14836 293 aaPredicted RBP10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 MFAP4P55083 255 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 PSMG4Q5JS54 123 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 FANCD2OSQ96PS1 177 aa10.75□□□□□ -0.69
TGFBR3-204ENST00000465892 F8VRH5 84 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 TSPAN13O95857 204 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 PLNP26678 52 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 ACACAQ13085 2346 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 KLRD1Q13241 179 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 ANKRD11Q6UB99 2663 aaPredicted RBP10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 THBDP07204 575 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 H7C1H1 209 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 SLC25A16P16260 332 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
TGFBR3-204ENST00000465892 FAM90A27PA6NNH2 459 aa10.73□□□□□ -0.69
TGFBR3-204ENST00000465892 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
TGFBR3-204ENST00000465892 RALYQ9UKM9 306 aaKnown RBP10.73□□□□□ -0.69
TGFBR3-204ENST00000465892 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
TGFBR3-204ENST00000465892 NUP37Q8NFH4 326 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms