RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 UQCC1Q9NVA1 299 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 TMEM14CQ9P0S9 112 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 PRELID1Q9Y255 219 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-38A0A0C4DH36 116 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 K7EP13 123 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-30P01768 117 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 NMBP08949 121 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-30-3P0DP02 117 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-30-5P0DP03 117 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 BTCP35070 178 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 RPL29P47914 159 aaKnown RBP6.86□□□□□ -1.31
GPNMB-206ENST00000465673 ZNF138P52744 262 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 MIR17HGQ75NE6 70 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 TMEM183AQ8IXX5 376 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 C12orf45Q8N5I9 185 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-206ENST00000465673 OR10G4Q8NGN3 311 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 MITD1Q8WV92 249 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 DEDD2Q8WXF8 326 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 FAM167A-AS1Q96KT0 104 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 SLC25A31Q9H0C2 315 aa6.86□□□□□ -1.31
GPNMB-206ENST00000465673 IGSF23A1L1A6 192 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 FAM25EA8MYX2 175 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 IBA57-AS1B1ANH7 110 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 LECT2O14960 151 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 NOL3O60936 208 aaKnown RBP6.85□□□□□ -1.31
GPNMB-206ENST00000465673 ORM1P02763 201 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
GPNMB-206ENST00000465673 OR10J4P0C629 311 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 FGF7P21781 194 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 PDE6HQ13956 83 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 VWC2Q2TAL6 325 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 Q8N3U1 123 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 NHLRC2Q8NBF2 726 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 RASL10AQ92737 203 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 TXNDC17Q9BRA2 123 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 C20orf85Q9H1P6 137 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 AAMDCQ9H7C9 122 aa6.85□□□□□ -1.31
GPNMB-206ENST00000465673 GPN1Q9HCN4 374 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-206ENST00000465673 C9JCJ5 164 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 GNRH2O43555 120 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 S100A5P33763 92 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 INPP1P49441 399 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 PPT1P50897 306 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 OR4C5Q8NGB2 326 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 PHYHIPLQ96FC7 376 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 SDHCQ99643 169 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-206ENST00000465673 NAGKQ9UJ70 344 aa6.84□□□□□ -1.31
GPNMB-206ENST00000465673 TRAV4A0A0B4J268 109 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 ZNF266Q14584 549 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 ZNF846Q147U1 533 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 TRIQKQ629K1 86 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 Q6ZSA8 131 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 TMEM252Q8N6L7 170 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 FXYD5Q96DB9 178 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 SPXQ9BT56 116 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 OR51M1Q9H341 326 aa6.83□□□□□ -1.32
GPNMB-206ENST00000465673 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-206ENST00000465673 C5orf51A6NDU8 294 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 EIF3GO75821 320 aaKnown RBP eCLIP6.82□□□□□ -1.32
GPNMB-206ENST00000465673 S100A11P31949 105 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 SULT1A1P50225 295 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-206ENST00000465673 S100A10P60903 97 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 RANP62826 216 aaKnown RBP6.82□□□□□ -1.32
GPNMB-206ENST00000465673 OR10J3Q5JRS4 329 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 FAM159AQ6UWV7 190 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 THAP6Q8TBB0 222 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 SEC22CQ9BRL7 303 aa6.82□□□□□ -1.32
GPNMB-206ENST00000465673 LYRM2Q9NU23 88 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-206ENST00000465673 IGHV3-73A0A0B4J1V6 119 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 C1QBP02746 253 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 GATA1P15976 413 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-206ENST00000465673 TIRAPP58753 221 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 RAB32Q13637 225 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 SPANXN2Q5MJ10 180 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 Q6AWC8 147 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 SLC25A29Q8N8R3 303 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 PAXXQ9BUH6 204 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 NPCDR1Q9BY65 106 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
GPNMB-206ENST00000465673 TRGV11A0A075B6L2 103 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 TRAV6A0A075B6T7 132 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 TRBV7-9A0A0J9YWB2 115 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 CCDC160A6NGH7 325 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 M0R2P5 195 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 NHLH2Q02577 135 aa6.8□□□□□ -1.32
GPNMB-206ENST00000465673 IL15RAQ13261 267 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms