RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ZFP30Q9Y2G7 519 aa12.66□□□□□ -0.38
PTPRU-206ENST00000465525 FBLL1A6NHQ2 334 aaKnown RBP12.65□□□□□ -0.38
PTPRU-206ENST00000465525 A8MTW9 85 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 ZNF80P51504 273 aaPredicted RBP12.65□□□□□ -0.38
PTPRU-206ENST00000465525 RPL23P62829 140 aaKnown RBP12.65□□□□□ -0.38
PTPRU-206ENST00000465525 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 DNAH3Q8TD57 4116 aa12.65□□□□□ -0.38
PTPRU-206ENST00000465525 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
PTPRU-206ENST00000465525 GCGP01275 180 aa12.64□□□□□ -0.39
PTPRU-206ENST00000465525 GPX1P07203 203 aa12.64□□□□□ -0.39
PTPRU-206ENST00000465525 LEPP41159 167 aa12.64□□□□□ -0.39
PTPRU-206ENST00000465525 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
PTPRU-206ENST00000465525 TUBA4BQ9H853 241 aa12.64□□□□□ -0.39
PTPRU-206ENST00000465525 IGHV4-30-4P0DP06 118 aa12.63□□□□□ -0.39
PTPRU-206ENST00000465525 SMUG1Q53HV7 270 aa12.63□□□□□ -0.39
PTPRU-206ENST00000465525 ODF3Q96PU9 254 aa12.63□□□□□ -0.39
PTPRU-206ENST00000465525 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
PTPRU-206ENST00000465525 M0R036 132 aa12.62□□□□□ -0.39
PTPRU-206ENST00000465525 CRISP2P16562 243 aa12.62□□□□□ -0.39
PTPRU-206ENST00000465525 CDKN1BP46527 198 aa12.62□□□□□ -0.39
PTPRU-206ENST00000465525 CRIP1P50238 77 aa12.62□□□□□ -0.39
PTPRU-206ENST00000465525 XCL2Q9UBD3 114 aa12.62□□□□□ -0.39
PTPRU-206ENST00000465525 TRAV12-3A0A0B4J271 114 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 KLLNB2CW77 178 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 TSPOP30536 169 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
PTPRU-206ENST00000465525 LY96Q9Y6Y9 160 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 A8MZ25 164 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 K7EIL1 84 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 ISOC2Q96AB3 205 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
PTPRU-206ENST00000465525 CRXO43186 299 aaPredicted RBP12.6□□□□□ -0.39
PTPRU-206ENST00000465525 SH2D1AO60880 128 aa12.6□□□□□ -0.39
PTPRU-206ENST00000465525 GIG44P09565 113 aaPredicted RBP12.6□□□□□ -0.39
PTPRU-206ENST00000465525 SMIM12Q96EX1 92 aa12.6□□□□□ -0.39
PTPRU-206ENST00000465525 LOC102724200A0A096LPH7 203 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-206ENST00000465525 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 C7orf71A4D174 169 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 CA1P00915 261 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-206ENST00000465525 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PTPRU-206ENST00000465525 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 RHEBQ15382 184 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
PTPRU-206ENST00000465525 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 SMCO4Q9NRQ5 59 aa12.59□□□□□ -0.39
PTPRU-206ENST00000465525 NUTF2P61970 127 aaKnown RBP12.58□□□□□ -0.4
PTPRU-206ENST00000465525 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
PTPRU-206ENST00000465525 NAGKQ9UJ70 344 aa12.58□□□□□ -0.4
PTPRU-206ENST00000465525 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
PTPRU-206ENST00000465525 DEFB121Q5J5C9 76 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 PFN1P07737 140 aaKnown RBP12.57□□□□□ -0.4
PTPRU-206ENST00000465525 RPL19P84098 196 aaKnown RBP12.57□□□□□ -0.4
PTPRU-206ENST00000465525 DEFA6Q01524 100 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 MORN3Q6PF18 240 aaPredicted RBP12.57□□□□□ -0.4
PTPRU-206ENST00000465525 NUDT10Q8NFP7 164 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
PTPRU-206ENST00000465525 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 RPS10P5Q9NQ39 176 aa12.57□□□□□ -0.4
PTPRU-206ENST00000465525 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 INSP01308 110 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
PTPRU-206ENST00000465525 Q6AWC8 147 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 CBLN2Q8IUK8 224 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 SFRP2Q96HF1 295 aa12.56□□□□□ -0.4
PTPRU-206ENST00000465525 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
PTPRU-206ENST00000465525 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
PTPRU-206ENST00000465525 ZNF324O75467 553 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-206ENST00000465525 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
PTPRU-206ENST00000465525 RNF212Q495C1 297 aa12.55□□□□□ -0.4
PTPRU-206ENST00000465525 BIN3Q9NQY0 253 aa12.55□□□□□ -0.4
PTPRU-206ENST00000465525 P01737 135 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 AMBPP02760 352 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 ORM1P02763 201 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 PRM2P04554 102 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 HTN1P15515 57 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 C1orf158Q8N1D5 194 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 MEGF8Q7Z7M0 2845 aa12.54□□□□□ -0.4
PTPRU-206ENST00000465525 KIR2DL5BA0A0G2JN68 375 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 KIR2DL5BA0A0G2JPC4 375 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
PTPRU-206ENST00000465525 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
PTPRU-206ENST00000465525 GZMBP10144 247 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 APOC4P55056 127 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
PTPRU-206ENST00000465525 KIR2DL5AQ8N109 375 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms