RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 TANC2Q9HCD6 1990 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 MYH1P12882 1939 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
USP25-207ENST00000464435 C9orf170A2RU37 121 aa2□□□□□ -2.09
USP25-207ENST00000464435 RBP2P50120 134 aa2□□□□□ -2.09
USP25-207ENST00000464435 GNG4P50150 75 aa2□□□□□ -2.09
USP25-207ENST00000464435 ASB16-AS1Q495Z4 193 aa2□□□□□ -2.09
USP25-207ENST00000464435 SCN3BQ9NY72 215 aa2□□□□□ -2.09
USP25-207ENST00000464435 PLXNA3P51805 1871 aa2□□□□□ -2.09
USP25-207ENST00000464435 COL11A1P12107 1806 aaPredicted RBP2□□□□□ -2.09
USP25-207ENST00000464435 MBD5Q9P267 1494 aa2□□□□□ -2.09
USP25-207ENST00000464435 BAHCC1Q9P281 2608 aa2□□□□□ -2.09
USP25-207ENST00000464435 RGS12O14924 1447 aa2□□□□□ -2.09
USP25-207ENST00000464435 MYH6P13533 1939 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 MGAMO43451 1857 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 A0A087WSZ3 146 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 LOC100130705A0A1B0GUX0 176 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 C2orf70A6NJV1 201 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 H3BRN7 92 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 CXCL8P10145 99 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 LINC01545Q5VT33 79 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 Q6ZUT4 128 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 PP6455Q8WZ26 134 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 PSMF1Q92530 271 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 C14orf144Q96I85 54 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 PPP3R2Q96LZ3 170 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 NOP16Q9Y3C1 178 aaKnown RBP1.99□□□□□ -2.09
USP25-207ENST00000464435 MPC1Q9Y5U8 109 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 BCL9LQ86UU0 1499 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 USP54Q70EL1 1684 aa1.99□□□□□ -2.09
USP25-207ENST00000464435 NCKAP5O14513 1909 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 MYH13Q9UKX3 1938 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 IFITM5A6NNB3 132 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 J3QLW9 94 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 M0R2P5 195 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 HYPMO75409 117 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 KIAA2026Q5HYC2 2103 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 C4orf3Q8WVX3 66 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 DPH3Q96FX2 82 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 SNRNP25Q9BV90 132 aaKnown RBP1.98□□□□□ -2.09
USP25-207ENST00000464435 BOKQ9UMX3 212 aaPredicted RBP1.98□□□□□ -2.09
USP25-207ENST00000464435 ERBINQ96RT1 1412 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 CNTLNQ9NXG0 1405 aa1.98□□□□□ -2.09
USP25-207ENST00000464435 PXDNLA1KZ92 1463 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 TRAV12-2A0A075B6T6 113 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 TPPP2P59282 170 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 PPP3R1P63098 170 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 PDE6HQ13956 83 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 Q1T7F1 81 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 MIC13Q5XKP0 118 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 LINC00269Q8N2A0 174 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 FAM19A2Q8N3H0 131 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 ATP6V0E2Q8NHE4 81 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 Q8TAT8 98 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 NAA60Q9H7X0 242 aa1.97□□□□□ -2.09
USP25-207ENST00000464435 MYH9P35579 1960 aaKnown RBP1.97□□□□□ -2.09
USP25-207ENST00000464435 ADAMTS7Q9UKP4 1686 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 KIF13AQ9H1H9 1805 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 SPAARA0A1B0GVQ0 90 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 A6NN06 94 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 S100A8P05109 93 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 HIST1H1DP16402 221 aaKnown RBP1.96□□□□□ -2.1
USP25-207ENST00000464435 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 ATP11AUNQ6ZP68 121 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 ZNF833PQ6ZTB9 187 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 GTF2H5Q6ZYL4 71 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 TXNDC17Q9BRA2 123 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 COA4Q9NYJ1 87 aa1.96□□□□□ -2.1
USP25-207ENST00000464435 VPS8Q8N3P4 1428 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 CCDC179H3BU77 68 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 BTG2P78543 158 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 C1orf137Q5JT78 98 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 FOXI2Q6ZQN5 318 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 Q8N2B8 174 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 VSTM2AQ8TAG5 236 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 SPACA4Q8TDM5 124 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 SEC11CQ9BY50 192 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 TTTY12Q9BZ98 90 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 TAS2R8Q9NYW2 309 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 SCN3AQ9NY46 2000 aa1.95□□□□□ -2.1
USP25-207ENST00000464435 COL4A2P08572 1712 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 COL24A1Q17RW2 1714 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.94□□□□□ -2.1
USP25-207ENST00000464435 FBN1P35555 2871 aaKnown RBP1.94□□□□□ -2.1
USP25-207ENST00000464435 CUL7Q14999 1698 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 HELZP42694 1942 aaKnown RBP1.94□□□□□ -2.1
USP25-207ENST00000464435 ADCYAP1P18509 176 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 FAM74A1Q5RGS3 127 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 TEX261Q6UWH6 196 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 ZCCHC23Q6ZST2 131 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 C3orf62Q6ZUJ4 267 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 C8orf59Q8N0T1 100 aaPredicted RBP1.94□□□□□ -2.1
USP25-207ENST00000464435 C5orf17Q8NAS9 161 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 PLPP5Q8NEB5 264 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 SPANXDQ9BXN6 97 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 AGPAT4-IT1Q9H0P7 198 aa1.94□□□□□ -2.1
USP25-207ENST00000464435 CHCHD2Q9Y6H1 151 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms