RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PLAC8L1A1L4L8 177 aa13.57□□□□□ -0.24
LMNB1-204ENST00000463908 K7EQM0 130 aa13.57□□□□□ -0.24
LMNB1-204ENST00000463908 HTN1P15515 57 aa13.57□□□□□ -0.24
LMNB1-204ENST00000463908 TMEM75Q8N9X5 138 aa13.57□□□□□ -0.24
LMNB1-204ENST00000463908 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
LMNB1-204ENST00000463908 TEX46H3BTG2 121 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 EMP1P54849 157 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 PRNTQ86SH4 94 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 C8orf49Q96NF6 230 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 TREM1Q9NP99 234 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
LMNB1-204ENST00000463908 EPPK1P58107 5090 aaKnown RBP13.56□□□□□ -0.24
LMNB1-204ENST00000463908 NANOS2P60321 138 aaKnown RBP13.55□□□□□ -0.24
LMNB1-204ENST00000463908 BLOC1S1P78537 153 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 Q6AWC8 147 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 C11orf45Q8TAV5 145 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 TCEAL7Q9BRU2 100 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 MANBALQ9NQG1 85 aa13.55□□□□□ -0.24
LMNB1-204ENST00000463908 TMEM189A5PLL7 270 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 FBLL1A6NHQ2 334 aaKnown RBP13.54□□□□□ -0.24
LMNB1-204ENST00000463908 C11orf94C9JXX5 98 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 F6UZH7 168 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 ZNF80P51504 273 aaPredicted RBP13.54□□□□□ -0.24
LMNB1-204ENST00000463908 TEX261Q6UWH6 196 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 RNASE8Q8TDE3 154 aaKnown RBP13.54□□□□□ -0.24
LMNB1-204ENST00000463908 LINC00467Q9BRT7 94 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 BIRC6Q9NR09 4857 aa13.54□□□□□ -0.24
LMNB1-204ENST00000463908 SCO2A0A1W2PP80 73 aa13.53□□□□□ -0.24
LMNB1-204ENST00000463908 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
LMNB1-204ENST00000463908 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
LMNB1-204ENST00000463908 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
LMNB1-204ENST00000463908 DKK2Q9UBU2 259 aa13.53□□□□□ -0.24
LMNB1-204ENST00000463908 CXorf65A6NEN9 183 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 C3orf84H3BNL1 204 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 TMEM183BQ1AE95 376 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 SAPCD1Q5SSQ6 148 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 ZNF493Q6ZR52 646 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 ZNF680Q8NEM1 530 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 TP53TG3Q9ULZ0 132 aa13.52□□□□□ -0.25
LMNB1-204ENST00000463908 IGHV1OR15-1A0A075B7D0 117 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 TRBV6-1A0A0K0K1D8 114 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 SPART-AS1P0CW21 52 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 ANXA2RQ3ZCQ2 193 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 CASC10Q5T4H9 136 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 ZNF767PQ75MW2 155 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 Q86TA4 180 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
LMNB1-204ENST00000463908 TMEM263Q8WUH6 116 aaKnown RBP13.51□□□□□ -0.25
LMNB1-204ENST00000463908 C16orf74Q96GX8 76 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 FMC1Q96HJ9 113 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 NDFIP1Q9BT67 221 aa13.51□□□□□ -0.25
LMNB1-204ENST00000463908 BCL2P10415 239 aa13.5□□□□□ -0.25
LMNB1-204ENST00000463908 AKR1C3P42330 323 aa13.5□□□□□ -0.25
LMNB1-204ENST00000463908 MUC21Q5SSG8 566 aa13.5□□□□□ -0.25
LMNB1-204ENST00000463908 C11orf72Q8NBR9 251 aa13.5□□□□□ -0.25
LMNB1-204ENST00000463908 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
LMNB1-204ENST00000463908 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 RGS13O14921 159 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 GCGP01275 180 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 LTAP01374 205 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 CRIP1P50238 77 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 MEF2BQ02080 365 aaPredicted RBP13.49□□□□□ -0.25
LMNB1-204ENST00000463908 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 PCNPQ8WW12 178 aaKnown RBP13.49□□□□□ -0.25
LMNB1-204ENST00000463908 C11orf52Q96A22 123 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 C11orf21Q9P2W6 132 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 VAX2Q9UIW0 290 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 ZFP30Q9Y2G7 519 aa13.49□□□□□ -0.25
LMNB1-204ENST00000463908 LYSTQ99698 3801 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 CBY3A6NI87 242 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 IFNA1P01562 189 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 UBE2G1P62253 170 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 Q6ZTC4 211 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
LMNB1-204ENST00000463908 GNRH2O43555 120 aa13.47□□□□□ -0.25
LMNB1-204ENST00000463908 S100A9P06702 114 aaKnown RBP13.47□□□□□ -0.25
LMNB1-204ENST00000463908 TDRG1Q3Y452 100 aa13.47□□□□□ -0.25
LMNB1-204ENST00000463908 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
LMNB1-204ENST00000463908 DERL1Q9BUN8 251 aa13.47□□□□□ -0.25
LMNB1-204ENST00000463908 NOP10Q9NPE3 64 aaKnown RBP13.47□□□□□ -0.25
LMNB1-204ENST00000463908 TIMM8BQ9Y5J9 83 aaPredicted RBP13.47□□□□□ -0.25
LMNB1-204ENST00000463908 DNAH1Q9P2D7 4330 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 CSMD3Q7Z407 3707 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 RBFOX3A6NFN3 312 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 LYRM9A8MSI8 78 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 PFN1P07737 140 aaKnown RBP13.46□□□□□ -0.25
LMNB1-204ENST00000463908 TAGLN2P37802 199 aaKnown RBP13.46□□□□□ -0.25
LMNB1-204ENST00000463908 FAM159AQ6UWV7 190 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 ZC2HC1AQ96GY0 325 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 MLST8Q9BVC4 326 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 MDFICQ9P1T7 246 aa13.46□□□□□ -0.25
LMNB1-204ENST00000463908 PDE6DO43924 150 aa13.45□□□□□ -0.26
LMNB1-204ENST00000463908 RPL35P42766 123 aaKnown RBP13.45□□□□□ -0.26
LMNB1-204ENST00000463908 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
LMNB1-204ENST00000463908 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms