RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 CENPVL3A0A0U1RRI6 287 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 DAD1P61803 113 aa10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHRNA4-202ENST00000463705 DAZAP2Q15038 168 aaPredicted RBP10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 TMEM95Q3KNT9 176 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 C11orf68Q9H3H3 251 aaKnown RBP10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 A0A087X0K7 114 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 LGALS1P09382 135 aaKnown RBP10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 DLX4Q92988 240 aaPredicted RBP10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 A0A1B0GUS0 222 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 CD5LO43866 347 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB113Q30KQ7 82 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 DOCK11Q5JSL3 2073 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 PLA2G5P39877 138 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 DEFB112Q30KQ8 113 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 MEGF9Q9H1U4 602 aa10.61□□□□□ -0.71
CHRNA4-202ENST00000463705 ZGRF1Q86YA3 2104 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 FOXE3Q13461 319 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 TSSC4Q9Y5U2 329 aaPredicted RBP10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 GAGE1Q13065 139 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 GAGE4Q13068 117 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 GAGE5Q13069 117 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 IGFBPL1Q8WX77 278 aa10.6□□□□□ -0.71
CHRNA4-202ENST00000463705 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 MED13LQ71F56 2210 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 NDUFS7O75251 213 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 SLAQ13239 276 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 NPC2P61916 151 aa10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
CHRNA4-202ENST00000463705 KNCNA6PVL3 124 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 TMEM243Q9BU79 118 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 SHANK1Q9Y566 2161 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 PSCAO43653 123 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 I3L2K1 104 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 K7EMI3 77 aa10.58□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 PRSS57Q6UWY2 283 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 C10orf105Q8TEF2 133 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 ZNF106Q9H2Y7 1883 aaKnown RBP10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 INS-IGF2F8WCM5 200 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV4-59P01825 116 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 SEM1Q6ZVN7 128 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 TECTAO75443 2155 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV4-61A0A0C4DH41 118 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 DLEU1O43261 78 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV7-81A0A0B4J1V7 117 aa10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 F5H768 121 aa10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 SIGMAR1Q99720 223 aa10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 RNF152Q8N8N0 203 aa10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 HOXD3P31249 432 aaPredicted RBP10.56□□□□□ -0.72
CHRNA4-202ENST00000463705 DNAJC30Q96LL9 226 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 K7EN84 100 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GAGE7O76087 117 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 STPG4Q8N801 248 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 OBSL1O75147 1896 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 NPYP01303 97 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 ZNRF2Q8NHG8 242 aa10.55□□□□□ -0.72
CHRNA4-202ENST00000463705 GP9P14770 177 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 K7EIM0 57 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 ZNF493Q6ZR52 646 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 IGHV4-30-2A0A087WSY4 118 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 TRAV26-2A0A0B4J265 109 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 RHOHQ15669 191 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 NAA38Q9BRA0 125 aaKnown RBP10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 AGPAT4-IT1Q9H0P7 198 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
CHRNA4-202ENST00000463705 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 TMEM89A2RUT3 159 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 CFHR3Q02985 330 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 Q6ZWC4 215 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 MED13Q9UHV7 2174 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms