RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OR10J3Q5JRS4 329 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 FAM122CQ6P4D5 195 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 C20orf85Q9H1P6 137 aa9.62□□□□□ -0.87
SMC1A-204ENST00000463684 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
SMC1A-204ENST00000463684 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
SMC1A-204ENST00000463684 RPL29P47914 159 aaKnown RBP9.61□□□□□ -0.87
SMC1A-204ENST00000463684 ZNF138P52744 262 aa9.61□□□□□ -0.87
SMC1A-204ENST00000463684 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
SMC1A-204ENST00000463684 GPN1Q9HCN4 374 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-204ENST00000463684 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
SMC1A-204ENST00000463684 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 IGHV3-30P01768 117 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 IGHV3-33P01772 117 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 PFN1P07737 140 aaKnown RBP9.6□□□□□ -0.87
SMC1A-204ENST00000463684 IGHV3-30-3P0DP02 117 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 IGHV3-30-5P0DP03 117 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 PYYP10082 97 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 BCAP31P51572 246 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 TMEM183AQ8IXX5 376 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 SLIRPQ9GZT3 109 aaKnown RBP9.6□□□□□ -0.87
SMC1A-204ENST00000463684 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 WDR83OSQ9Y284 106 aa9.6□□□□□ -0.87
SMC1A-204ENST00000463684 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
SMC1A-204ENST00000463684 TRBV7-9A0A0J9YWB2 115 aa9.59□□□□□ -0.87
SMC1A-204ENST00000463684 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-204ENST00000463684 ZNF846Q147U1 533 aa9.59□□□□□ -0.87
SMC1A-204ENST00000463684 MRPS26Q9BYN8 205 aaKnown RBP9.59□□□□□ -0.87
SMC1A-204ENST00000463684 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
SMC1A-204ENST00000463684 CST7O76096 145 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 CAV2P51636 162 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 TMBIM6P55061 237 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 BAXQ07812 192 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 ZNF266Q14584 549 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 LAGE3Q14657 143 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 Q8TAT8 98 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 BCL7BQ9BQE9 202 aa9.58□□□□□ -0.88
SMC1A-204ENST00000463684 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 M0R2P5 195 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 LECT2O14960 151 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 NDUFB6O95139 128 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 NBEAP1P0C6P0 100 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 WFDC2Q14508 124 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 FLVCR2Q9UPI3 526 aa9.57□□□□□ -0.88
SMC1A-204ENST00000463684 NOL3O60936 208 aaKnown RBP9.56□□□□□ -0.88
SMC1A-204ENST00000463684 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
SMC1A-204ENST00000463684 CSN1S1P47710 185 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 ASAH1Q13510 395 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 BAK1Q16611 211 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 LELP1Q5T871 98 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 LSM5Q9Y4Y9 91 aaKnown RBP9.56□□□□□ -0.88
SMC1A-204ENST00000463684 V9GYH0 126 aa9.56□□□□□ -0.88
SMC1A-204ENST00000463684 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 UBE2L5PA0A1B0GUS4 154 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 NAP1L6A6NFF2 107 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 S100A11P31949 105 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 INPP1P49441 399 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 KRTAP10-4P60372 401 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-204ENST00000463684 VWC2Q2TAL6 325 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 LINC01620Q4KN68 170 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 Q6AWC8 147 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 CHAC2Q8WUX2 184 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 CHAC1Q9BUX1 264 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 SLC25A2Q9BXI2 301 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 NAGKQ9UJ70 344 aa9.55□□□□□ -0.88
SMC1A-204ENST00000463684 RBAKDNA6NC62 111 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 RBFOX3A6NFN3 312 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 FAM24AA6NFZ4 105 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 FGF7P21781 194 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
SMC1A-204ENST00000463684 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 OR51M1Q9H341 326 aa9.54□□□□□ -0.88
SMC1A-204ENST00000463684 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 FBLL1A6NHQ2 334 aaKnown RBP9.53□□□□□ -0.88
SMC1A-204ENST00000463684 RS1O15537 224 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 GNRH2O43555 120 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 PVALBP20472 110 aaPredicted RBP9.53□□□□□ -0.88
SMC1A-204ENST00000463684 S100A5P33763 92 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 HBG1P69891 147 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 HBG2P69892 147 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 CIRBP-AS1Q8TBR5 109 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 MITD1Q8WV92 249 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 GTSF1LQ9H1H1 148 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 LENEPQ9Y5L5 61 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
SMC1A-204ENST00000463684 FAM25EA8MYX2 175 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 CIDEAO60543 219 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 SULT1A1P50225 295 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 RHOHQ15669 191 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 GCSAMLQ5JQS6 135 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 STX12Q86Y82 276 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 Q8N976 141 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
SMC1A-204ENST00000463684 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms