RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 HMGB3O15347 200 aaKnown RBP9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 SEC11BP0C7V7 166 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 ODF1Q14990 250 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 EIF4E3Q8N5X7 224 aaKnown RBP9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 UMAD1C9J7I0 102 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 K7EQM0 130 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 NKX6-2Q9C056 277 aaPredicted RBP9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 CBY3A6NI87 242 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 EIF3GO75821 320 aaKnown RBP eCLIP9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 BTN1A1Q13410 526 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 DPPA3Q6W0C5 159 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 ZNF767PQ75MW2 155 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 LINC00612Q8N6U2 182 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 HYLS1Q96M11 299 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 DNAH1Q9P2D7 4330 aa9.28□□□□□ -0.92
R3HDM1-213ENST00000463230 SNURFLB1AK76 121 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 J3KRW8 73 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 HTN1P15515 57 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 ZNF726P1Q15940 193 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 Q6AWC8 147 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 GOLT1AQ6ZVE7 132 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 ARL2-SNX15V9GYD0 113 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 LY6G6CO95867 125 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 PRM2P04554 102 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 Q8TAT8 98 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 STOML3Q8TAV4 291 aa9.27□□□□□ -0.93
R3HDM1-213ENST00000463230 TCRAP04437 139 aa9.26□□□□□ -0.93
R3HDM1-213ENST00000463230 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
R3HDM1-213ENST00000463230 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
R3HDM1-213ENST00000463230 NDFIP1Q9BT67 221 aa9.26□□□□□ -0.93
R3HDM1-213ENST00000463230 ZNF471Q9BX82 626 aaPredicted RBP9.26□□□□□ -0.93
R3HDM1-213ENST00000463230 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 MAP1LC3B2A6NCE7 125 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 ATP5G1P05496 136 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 TPT1P13693 172 aaKnown RBP9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 ATP5G3P48201 142 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 PRR9Q5T870 116 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 TMUB2Q71RG4 321 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 MAP1LC3BQ9GZQ8 125 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 LYSTQ99698 3801 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 GGTLC3B5MD39 225 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 C18orf15Q96N68 181 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 ATG101Q9BSB4 218 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 RPH3ALQ9UNE2 315 aa9.25□□□□□ -0.93
R3HDM1-213ENST00000463230 C1QBP02746 253 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 DEFB130BP0DP73 79 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 DEFB130AP0DP74 79 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 FHITP49789 147 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 TCL1AP56279 114 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 LGALSLQ3ZCW2 172 aaPredicted RBP9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 P0DMU3 169 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 GNG5P63218 68 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 MBD3L1Q8WWY6 194 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 TP53TG3Q9ULZ0 132 aa9.24□□□□□ -0.93
R3HDM1-213ENST00000463230 RYR2Q92736 4967 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 TRAV21A0A0B4J279 112 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 PPT1P50897 306 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 ZNF415Q09FC8 603 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 TDRG1Q3Y452 100 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 HIST1H2BAQ96A08 127 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 TREM1Q9NP99 234 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 HTN3P15516 51 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 RAB5CP51148 216 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 LGALS9BQ3B8N2 356 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
R3HDM1-213ENST00000463230 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 FAM74A7A6NL05 159 aa9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 FLI1Q01543 452 aaPredicted RBP9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 KLF12Q9Y4X4 402 aa9.22□□□□□ -0.93
R3HDM1-213ENST00000463230 F6UZH7 168 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 SPINK4O60575 86 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 IFNA7P01567 189 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 TMEM88Q6PEY1 159 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 GSN-AS1Q9NRJ2 163 aa9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 PLECQ15149 4684 aaKnown RBP9.21□□□□□ -0.93
R3HDM1-213ENST00000463230 TRAV8-1A0A0A6YYK1 113 aa9.21□□□□□ -0.94
R3HDM1-213ENST00000463230 IGLV2-11P01706 119 aa9.21□□□□□ -0.94
R3HDM1-213ENST00000463230 FGF8P55075 233 aaPredicted RBP9.21□□□□□ -0.94
R3HDM1-213ENST00000463230 KCNS1Q96KK3 526 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms