RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CDKN1BP46527 198 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 LINC01551Q86U37 167 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 KRBOX1C9JBD0 128 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
COL6A1-202ENST00000463060 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
COL6A1-202ENST00000463060 TSPOP30536 169 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
COL6A1-202ENST00000463060 SPINK13Q1W4C9 94 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 SMUG1Q53HV7 270 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
COL6A1-202ENST00000463060 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
COL6A1-202ENST00000463060 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
COL6A1-202ENST00000463060 AMBPP02760 352 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
COL6A1-202ENST00000463060 FXYD7P58549 80 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
COL6A1-202ENST00000463060 GFI1BQ5VTD9 330 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 Q6AWC8 147 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 Q6ZQT7 251 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 CSTL1Q9H114 145 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
COL6A1-202ENST00000463060 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 GPX1P07203 203 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
COL6A1-202ENST00000463060 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 BTN1A1Q13410 526 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 OR5I1Q13606 314 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
COL6A1-202ENST00000463060 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
COL6A1-202ENST00000463060 C7orf71A4D174 169 aa10.46□□□□□ -0.73
COL6A1-202ENST00000463060 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.73
COL6A1-202ENST00000463060 RNASE4P34096 147 aaKnown RBP10.46□□□□□ -0.73
COL6A1-202ENST00000463060 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
COL6A1-202ENST00000463060 C11orf21Q9P2W6 132 aa10.46□□□□□ -0.73
COL6A1-202ENST00000463060 J3KRW8 73 aa10.45□□□□□ -0.74
COL6A1-202ENST00000463060 PFN1P07737 140 aaKnown RBP10.45□□□□□ -0.74
COL6A1-202ENST00000463060 MGST1P10620 155 aaKnown RBP10.45□□□□□ -0.74
COL6A1-202ENST00000463060 PNRC1Q12796 327 aaPredicted RBP10.45□□□□□ -0.74
COL6A1-202ENST00000463060 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
COL6A1-202ENST00000463060 C1orf158Q8N1D5 194 aa10.45□□□□□ -0.74
COL6A1-202ENST00000463060 C20orf144Q9BQM9 153 aa10.45□□□□□ -0.74
COL6A1-202ENST00000463060 XCL2Q9UBD3 114 aa10.45□□□□□ -0.74
COL6A1-202ENST00000463060 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 SH2D1AO60880 128 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
COL6A1-202ENST00000463060 FRMD6-AS1P0C7T7 363 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 FAM162BQ5T6X4 162 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 BIN3Q9NQY0 253 aa10.44□□□□□ -0.74
COL6A1-202ENST00000463060 UBE2CO00762 179 aa10.43□□□□□ -0.74
COL6A1-202ENST00000463060 APOC4P55056 127 aa10.43□□□□□ -0.74
COL6A1-202ENST00000463060 ADIRFQ15847 76 aa10.43□□□□□ -0.74
COL6A1-202ENST00000463060 ZNF705AQ6ZN79 300 aaPredicted RBP10.43□□□□□ -0.74
COL6A1-202ENST00000463060 LINC00467Q9BRT7 94 aa10.43□□□□□ -0.74
COL6A1-202ENST00000463060 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
COL6A1-202ENST00000463060 OSTCQ9NRP0 149 aa10.43□□□□□ -0.74
COL6A1-202ENST00000463060 IGKV3D-20A0A0C4DH25 116 aa10.42□□□□□ -0.74
COL6A1-202ENST00000463060 INSP01308 110 aa10.42□□□□□ -0.74
COL6A1-202ENST00000463060 APOC3P02656 99 aa10.42□□□□□ -0.74
COL6A1-202ENST00000463060 TDRG1Q3Y452 100 aa10.42□□□□□ -0.74
COL6A1-202ENST00000463060 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
COL6A1-202ENST00000463060 B4DEV8 164 aa10.41□□□□□ -0.74
COL6A1-202ENST00000463060 LINC01559Q495D7 138 aa10.41□□□□□ -0.74
COL6A1-202ENST00000463060 Q6ZWC4 215 aa10.41□□□□□ -0.74
COL6A1-202ENST00000463060 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
COL6A1-202ENST00000463060 SFRP2Q96HF1 295 aa10.41□□□□□ -0.74
COL6A1-202ENST00000463060 H7BYZ3 331 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 ATP6V1G1O75348 118 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.74
COL6A1-202ENST00000463060 TMEM256Q8N2U0 113 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.74
COL6A1-202ENST00000463060 PYGO2Q9BRQ0 406 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 V9GYV3 84 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
COL6A1-202ENST00000463060 MEGF8Q7Z7M0 2845 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 IGHV1OR15-1A0A075B7D0 117 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 P01737 135 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 DNLZQ5SXM8 178 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 SVBPQ8N300 66 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 RNF183Q96D59 192 aa10.39□□□□□ -0.75
COL6A1-202ENST00000463060 C7orf77A4D0Y5 90 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 M0R036 132 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 ORM1P02763 201 aa10.38□□□□□ -0.75
COL6A1-202ENST00000463060 PRM2P04554 102 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms